| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0240 |
|---|
| Symbol | |
|---|
| ID | 4256070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 263736 |
|---|
| End bp | 265103 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638120847 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_736302 |
|---|
| Protein GI | 114045752 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAT GGGGTGGAAG ATTTCAGGGC GAAACCAGTG CGCTATTTAA ATTATTCAAC
GATTCACTAC CTGTGGATTA CCGTTTGTTT GAGCAGGATG TGGTAGGCTC TATCGCTTGG
GCCGATGCAA TTGCCAGTGT CGGCATTATC ACTGCTACTG AATGCAGCGA TTTGAAGAAA
GCACTGAACG AGCTGCTGGT GGAAGTGAAG GGCGATCCTG CGATTATTCT CGCATCGGGC
GCGGAAGATA TTCACAGCTT CGTGGAGTCG GCGTTGATCG CTAAAGTCGG CGATCTGGGT
AAAAAACTCC ATACGGGCCG TAGCCGTAAC GACCAAGTCG CTACCGATTT AAAACTCTGG
TGCCAATCCG AAGGTGCGGC ATTAGTGGCT CGCCTACAAA CCTTACGCAG CGAACTTATC
GCGCTTGCTG AGCGTGAATT CGATGCTGTT ATGCCGGGCT ACACTCACCT GCAACGTGCT
CAGCCAGTCA CGTTTGGCCA CTGGTGCTTA GCTTATGTGG AGATGATTGA GCGTGATCTT
AGCCGCTTAA CCGATGCCTT AAAGCGCGCC AATACCTGTC CGCTCGGTTC GGGCGCCTTG
GCGGGCACAG CCTATCAAAT GGATAGACAT TCGCTGGCTG TGGCACTGAA CTTTGCATCG
CCAACCTTAA ACAGTTTGGA CAGCGTGTCG GACCGCGACC ATGTAGTTGA GCTGTGCGGA
GCCGCCTCAA TTAGCATGAT GCACTTAAGC CGTATGGCCG AAGATTTGAT TTTCTTCAAC
TCGGGTGAAG CGGGCTTTAT CTCATTAAGT GATGAAGTGA CCTCGGGGTC ATCGTTAATG
CCACAAAAGA AAAACCCCGA TGCGCTGGAG CTTATTCGCG GTAAAACGGG CCGTGTTTAT
GGCAGCTTAG TGGGCATTCT CACCACTATG AAAGCCCTGC CTCTGGCCTA CAATAAAGAC
ATGCAGGAAG ACAAAGAAGG CCTGTTCGAT GTGGTCGACA GCTGGGCAAT CTGCTTAGAT
ATGGCGGCAT TAGTGTTATC TGGCTTAGTC GTTAACCGCC CGAATGCGCT GTTAGCCGCG
CAGCAAGGTT ATGCCAACGC GACCGAATTG GCGGATTATC TGGTGTCTAA AGGCATGCCA
TTCCGCGAAG CGCACCATGT GGTCGGTGTG GCTGTCGTTG CCGCGATCGC TAAGAAGATC
CCGTTAGAAG CCTTCTCTCT CGCTGAGTTT AGAACTTTTG CCGATATCAT CGAGGCGGAT
GTGTATCCCA ACCTCACTAT CGAAGCCTGT TTGGCAAAAC GTGATGTCCT CGGTGGTACG
GCGCTAACTC AGGTGAAGCA AGCCATCGCT GCGAAGAAAG TTATTTAA
|
|---|
| Protein sequence | MALWGGRFQG ETSALFKLFN DSLPVDYRLF EQDVVGSIAW ADAIASVGII TATECSDLKK
ALNELLVEVK GDPAIILASG AEDIHSFVES ALIAKVGDLG KKLHTGRSRN DQVATDLKLW
CQSEGAALVA RLQTLRSELI ALAEREFDAV MPGYTHLQRA QPVTFGHWCL AYVEMIERDL
SRLTDALKRA NTCPLGSGAL AGTAYQMDRH SLAVALNFAS PTLNSLDSVS DRDHVVELCG
AASISMMHLS RMAEDLIFFN SGEAGFISLS DEVTSGSSLM PQKKNPDALE LIRGKTGRVY
GSLVGILTTM KALPLAYNKD MQEDKEGLFD VVDSWAICLD MAALVLSGLV VNRPNALLAA
QQGYANATEL ADYLVSKGMP FREAHHVVGV AVVAAIAKKI PLEAFSLAEF RTFADIIEAD
VYPNLTIEAC LAKRDVLGGT ALTQVKQAIA AKKVI
|
|---|
| |