| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0216 |
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| Symbol | rpsM |
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| ID | 4255678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 235794 |
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| End bp | 236150 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120821 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_736279 |
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| Protein GI | 114045729 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000313091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00577803 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGGCCCGTA TCGCTGGCAT TAACATTCCT GATCAAAAGC ATACAGTCAT CGCATTGACT
GCAATTTTCG GCATCGGCCG TACTCGCGCT AGAGCAATCT GCGCGGCTAC GTCAATTGCT
GAAACTGCTA AGATCAAGGA ATTGAGCGAA GCTCAAATCG ACACCCTACG CGAAGAAGTT
GCCAAATACT TAGTAGAAGG TGACTTACGT CGTGAGATTT CTATGAACAT CAAGCGTCTT
ATGGATCTTG GTTGTTATCG TGGTCTCCGC CATCGTCGTA GCCTGCCTCT TCGTGGGCAA
CGTACTAAGA CCAATGCGCG TACGCGTAAA GGTCCACGTA AACCAATCAA GAAGTAA
|
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| Protein sequence | MARIAGINIP DQKHTVIALT AIFGIGRTRA RAICAATSIA ETAKIKELSE AQIDTLREEV
AKYLVEGDLR REISMNIKRL MDLGCYRGLR HRRSLPLRGQ RTKTNARTRK GPRKPIKK
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