Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0214 |
Symbol | secY |
ID | 4255676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 234203 |
End bp | 235543 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638120819 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_736277 |
Protein GI | 114045727 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000092283 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00772115 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAAC CAGGACTTGA TTTAAAAAGC GCGAAAGGTG GACTTTCTGA ATTGAAAGCT CGCCTCCTGT TCGTGATTGG TGCGATTATC GTCTTTAGAG CCGGTTCGTT TGTGCCAATT CCTGGTATTG ACGCAGCTGT ATTAGCAGAG CTGTTTGCTC AGCAAAAAGG TACCATCCTT GGCATGTTTA ACATGTTCTC GGGTGGTGCT CTTTCCCGTG CTTCTATCTT CGCATTAGGT ATCATGCCGT ACATTTCGGC ATCGATTATC ATGCAGTTAT TGACTGTTGT GCATCCAGCA CTCGCTGAAT TGAAAAAAGA AGGCGAGTCT GGACGTAAAA AAATCAGTCA GTACACACGA TGGGGTACGT TGGTGCTGGG TACATTCCAG TCGATCGGTA TTGCAACAGG GTTACCAAAC TTAGTCCCTG GCCTTGTGGT CAACATTGGA TTCGGTTTCT ACTTTGTAGC GGTTGTGAGC TTAGTAACAG GAACTATGTT CCTGATGTGG CTAGGTGAAC AAATTACCGA ACGAGGTATA GGTAACGGTA TCTCGATTTT AATTTTCGCA GGTATTGTTG CTGGATTACC TTCCGCTATC GGCCAAACGG CTGAGCAGGC GCGTCAAGGT GACCTGAATG TGTTAGTATT GTTGTTGCTC GCGGTAATTA TTTTTGCTGT GACTTATTTC GTGGTGTTTG TAGAACGTGG TCAACGTCGT ATCGTTGTTA ACTACGCTAA GCGCCAGCAA GGCCGTAAGG TGTTCGCTGC GCAATCTACT CACTTGCCGC TGAAAATAAA CATGGCGGGT GTAATTCCCC CAATTTTTGC GTCAAGCATC ATTTTGTTCC CAGGTACACT GGCTCAGTGG TTTGGTCAAA ATGAGTCTAT GTCATGGTTA AGTGATTTTT CACTGGCTGT GTCACCAGGA CAACCGCTTT ACTCATTATT GTATGCAGCA GCGATTATCT TCTTCTGTTT CTTCTATACT GCGTTGGTAT TTAACCCACG TGAAACAGCA GATAACCTGA AGAAGAGTGG TGCATTCATC CCTGGGATCC GTCCTGGAGA ACAGACTTCG CGTTACATTG ATAAAGTAAT GACTCGCCTA ACATTAGCTG GCGCGTTATA CATTACCTTT ATCTGTTTAA TTCCGGAGTT CATGTTAATT GCGTGGAAAG TACAGTTCTA TTTTGGCGGT ACTTCACTAC TAATTATGGT AGTCGTAATC ATGGACTTCA TGGCTCAGGT TCAGACCCAT ATGATGTCAC ATCAATATGA GTCTGTGATG AAGAAAGCTA ACCTAGTAAA CAAAGCGAAT TTGGATCGCT TTGGTCGCTA A
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Protein sequence | MAKPGLDLKS AKGGLSELKA RLLFVIGAII VFRAGSFVPI PGIDAAVLAE LFAQQKGTIL GMFNMFSGGA LSRASIFALG IMPYISASII MQLLTVVHPA LAELKKEGES GRKKISQYTR WGTLVLGTFQ SIGIATGLPN LVPGLVVNIG FGFYFVAVVS LVTGTMFLMW LGEQITERGI GNGISILIFA GIVAGLPSAI GQTAEQARQG DLNVLVLLLL AVIIFAVTYF VVFVERGQRR IVVNYAKRQQ GRKVFAAQST HLPLKINMAG VIPPIFASSI ILFPGTLAQW FGQNESMSWL SDFSLAVSPG QPLYSLLYAA AIIFFCFFYT ALVFNPRETA DNLKKSGAFI PGIRPGEQTS RYIDKVMTRL TLAGALYITF ICLIPEFMLI AWKVQFYFGG TSLLIMVVVI MDFMAQVQTH MMSHQYESVM KKANLVNKAN LDRFGR
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