Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0206 |
Symbol | rplE |
ID | 4255334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 230875 |
End bp | 231414 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638120811 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_736269 |
Protein GI | 114045719 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000474066 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00760067 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCGAAAC TGCATGATAA ATATCAAGAG ACTGTTGTCG CTGAACTGAC TAAAAAGTTC GGTTATACCA GTGTCATGCA AGTCCCTCGG ATTGAGAAAA TCACCCTGAA CATGGGTGTT GGCGAAGCCG TTGCAGACAA AAAAGTTATG GAACATGCTG TTCGTGACAT GACTGCAATT GCTGGTCAAA AACCAGTAGT AACTGTTGCT CGTAAATCAG TTGCTGGTTT TAAAATCCGT GAAGGCTACC CTATTGGCTG TAAAGTGACC CTGCGCGGTG AGCGTATGTG GGAATTCTTA GAGCGTTTAG TTGACATCGC AATCCCACGT ATTCGTGACT TCCGTGGTCT GAGCGCTAAA GCGTTTGACG GCCGTGGCAA CTACGCGATG GGCGTGCGTG AGCAGATCAT TTTCCCAGAA ATCGATTACG ATAAAATCGA TAAGATTCGC GGTATGGATA TTGTTATCAC TACCTCTGCG AATACTGACG AAGAAGGTCG TGCTTTGTTA GACGCTTTTA ACTTCCCATT CAAGAAATAA
|
Protein sequence | MAKLHDKYQE TVVAELTKKF GYTSVMQVPR IEKITLNMGV GEAVADKKVM EHAVRDMTAI AGQKPVVTVA RKSVAGFKIR EGYPIGCKVT LRGERMWEFL ERLVDIAIPR IRDFRGLSAK AFDGRGNYAM GVREQIIFPE IDYDKIDKIR GMDIVITTSA NTDEEGRALL DAFNFPFKK
|
| |