| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0197 |
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| Symbol | rplB |
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| ID | 4255325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 226961 |
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| End bp | 227785 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120802 |
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| Product | 50S ribosomal protein L2 |
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| Protein accession | YP_736260 |
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| Protein GI | 114045710 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0090] Ribosomal protein L2 |
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| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0317166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000296247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAGTTA TTAAGTGTAA GCCAACCTCT CCAGGTCGTC GCCACGTTGT TAAAGTGGTG
AACTCTGACC TGCACAAGGG TAAACCTTTT GCTGGCCTGT TGGCGAAAAA ATCTAAAAGT
GGTGGCCGTA ACAATACTGG CCGTATCACT GTTCGTCACG TTGGTGGCGG TCACAAGCAG
CACTACCGTT TAATCGACTT CAAACGCGAT AAAGACGGTA TCCCTGCAAA AATTGAGCGT
CTGGAATACG ATCCAAACCG TACTGCGCAC ATCGCTCTAG TACTGTATGC GGATGGTGAG
CGTCGTTACA TTCTTGCTGC TAAAGGCATG CAAGCTGGCG ATAAGATCCA GTCTGGTGTT
GAAGCCGAAA TCAAAACCGG TAACGCAATG CCACTGCGCA ACATTCCAGT AGGTTCTGTT
GTGCACGCTG TAGAAATGAA GCCTGGTAAA GGTGCTCAGA TCGCGCGTTC AGCGGGTGCT
TATGTACAAG TTGTTGCTCG TGATGGCGCA TATGCCACTT TACGTCTTCG CTCTGGCGAA
ATGCGCAAAG TGCCAGTTGA TTGCCGCGCA ACATTTGGTG AAGTTGGTAA TGCCGAACAC
ATGCTACGCC AGTTAGGTAA AGCAGGTGCT AAGCGCTGGA GAGGCGTTCG CCCAACAGTT
CGCGGTGTTG CAATGAACCC AGTAGACCAC CCACACGGTG GTGGTGAAGG CCGTACTTCT
GGTGGTCGTC ACCCAGTGAC TCCATGGGGT GTGCCAACTA AGGGTTATAA GACTCGTAGT
AACAAGCGCA CTGACAAGTA CATCGTACGT CGTCGTAATA AATAG
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| Protein sequence | MAVIKCKPTS PGRRHVVKVV NSDLHKGKPF AGLLAKKSKS GGRNNTGRIT VRHVGGGHKQ
HYRLIDFKRD KDGIPAKIER LEYDPNRTAH IALVLYADGE RRYILAAKGM QAGDKIQSGV
EAEIKTGNAM PLRNIPVGSV VHAVEMKPGK GAQIARSAGA YVQVVARDGA YATLRLRSGE
MRKVPVDCRA TFGEVGNAEH MLRQLGKAGA KRWRGVRPTV RGVAMNPVDH PHGGGEGRTS
GGRHPVTPWG VPTKGYKTRS NKRTDKYIVR RRNK
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