Gene Shewmr7_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0190 
Symbol 
ID4257383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp220802 
End bp221272 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content46% 
IMG OID638120795 
Product30S ribosomal protein S7 
Protein accessionYP_736253 
Protein GI114045703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0202713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000349844 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCAAGAC GTCGCGTTGT AGGACAACGT AAAATCCTAC CAGATCCAAA GTTTCACAGT 
GAGTTGCTGG CTAAGTTCAT CAACGTCATT ATGCAGGACG GCAAAAAGTC GACTGCTGAA
AAAATCATTT ACAAGGCTCT TGATGTTATC GCTGAAAAGA AAGGCGCTAA CCATTTAGAC
ATCCTTGAAG CAGCCCTGGA CAACGTTCGC CCATCAGTCG AAGTTAAATC TCGTCGCGTT
GGTGGTTCTA CTTACCAGGT ACCATGTGAA GTTCGTCCTG TGCGTCGTAA CGCACTGGCG
ATGCGCTGGT TAGTTGAAGC TGCTCGTAAG CGTGGTGAAA AATCTATGGC TTTACGTCTA
GCAGGTGAAA TGCTAGATGC GTCTGAAAAC AAAGGTACTG CTGTTAAGAA GCGTGAAGAC
GTGCATCGCA TGGCTGAAGC TAACAAAGCC TTTGCTCATT ACCGTTGGTA A
 
Protein sequence
MPRRRVVGQR KILPDPKFHS ELLAKFINVI MQDGKKSTAE KIIYKALDVI AEKKGANHLD 
ILEAALDNVR PSVEVKSRRV GGSTYQVPCE VRPVRRNALA MRWLVEAARK RGEKSMALRL
AGEMLDASEN KGTAVKKRED VHRMAEANKA FAHYRW