Gene Shewmr7_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0144 
Symbol 
ID4257060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp163483 
End bp165216 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content49% 
IMG OID638120740 
Producthypothetical protein 
Protein accessionYP_736207 
Protein GI114045657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAC CTAAACTGCT CTCTTTGCTA ATCGCCACCA GTTTGCTGAC GGCATGTTCT 
GGCTCAGACG ATAAAGATGA CACCACCACG ACGCCAGAGC CGACGCCTCC TACAGAATAC
ACACATAAAG TCACAGGTCA GGTCACTTAT ATCGGCGCTA TCGCCGGGGC CAACGTGTGC
GTCGATCTCA ACCAAGACTT AAGCTGCTCA GAGGGTGAAC CGAGCACCAC TACGGACACT
GACGGTAAGT ATCAAATCGA TTGGAAAAGC GAGACCGAAA AACCTAACTA TTACCTGTTG
GCCAATTGGA TTGATAACGC GGCGTCATCT GCACGCTCAG CATTGGCGAT GAGCTCCGCC
GCAGCTAACA CCAACGCCAC CACTGGCGGC ATGAATATCG TTGCCCTGCC CGATCATGCG
GGTCATATCA ACGCGCTGAC CAATATTGAG TTTTCACGCT ATCGCAAGAT GATTGAGGCC
GACTTAACGC CACAGCAAGT GATTGAGTTC CGCGCCAAAC TCAAATCCTT ATACGCCACT
GGATTTAAAC AAGTCGAAGC CGATTTATTT AGTCTTTCGC CCGAAATCAC TCTGCAACCC
ACATTTCTCG ACACCCTGCT GTTACACGAT TACCTGTTAA ACCTCACCAA TGAGCGCACA
GTGGAAATTT TGGCGGCTAT CGAAGTGTTA ATCGCCGCAT TTGAAGCCTT CGAGAATTTA
ATCCTAGGGT ATGGTTTTGG CACTGAGGCT TATCTGCAAA CTAATCCCGT TGCCGTCACC
AATAAGGTGG AGAGCACATT AGTGTCCTTC GGTTATATGG AAGCGCCGGT TGATGACAAG
GCGATGAACA GCACTGACTG GGATACAGTG TTTAGCAGCA TGCTCAATCA TACCGACGCA
TCTCATGTGC TCAATATCGC CACCGTTCGC AACAGCCACT TTGTCAGCTT AGATTACGGT
ACTGCTGACC AAACTCTTAC GGGGGTATTT TCAGGTGACG CTGTGATGAT CTTCGACAAC
ACGTCAGGAG AGGAAGTCCC TACCGAATGC TGGAATGAGC CGATGAAGAA ATGGATCAAT
GCCTCGCGTA ACGACCAAGG GTATGTCCTT AAAGAACCTG TGATTGAAGG CAATCAATTA
AAAACCGTTT ATGCCGGCAC TGAAGTCCCT GTCGAAATAA ATTTCCATAA GTATCAAAAC
ACGGCCGCTG ACTGGCAAGA TTTGCTGGCA AACCTCCCGA GCGACCTCAA ACTGGCGTCA
CTCAGCTGGC CTGCGCAAAT ATATCGCATG GATATTAAAC AAACGGCCGA CGTGTTATGC
CGCGAAGAAG ATCCCACCAC CTATGAAACG GGCGTTGAAA CCGCGAGCGA GCTTTCTACT
GGCTTGATCG TGGAGCTATT GTGGCCCTTC GCTTACCCCG AGAGTTACGT TGAGGACTCA
ACGAATAAAT TCACCATTCT CGATAGCTTC GGTCAGCCTG AAAGCCAACA TGAATGGAGC
ATTAGCACCA GTCCAAATGG CGGCAAGCTG CTAACTATCA CTGAAATTGT GGAGGATCCG
ATTGCGAGCC AGATGGTGCA ACCGAGCTAC TACCTTGTGA CCTCAAACTT GCTGACTGAA
GTTGAGCTAA ACACGGCATT TGATACGACT GACAATAAAC AGTTATATCG CTTTACCTAC
GATCAAAGCT TCAGCAATAC CCTGCACAAC CACTTTAAGT CGCTAGCAAA GTAA
 
Protein sequence
MFKPKLLSLL IATSLLTACS GSDDKDDTTT TPEPTPPTEY THKVTGQVTY IGAIAGANVC 
VDLNQDLSCS EGEPSTTTDT DGKYQIDWKS ETEKPNYYLL ANWIDNAASS ARSALAMSSA
AANTNATTGG MNIVALPDHA GHINALTNIE FSRYRKMIEA DLTPQQVIEF RAKLKSLYAT
GFKQVEADLF SLSPEITLQP TFLDTLLLHD YLLNLTNERT VEILAAIEVL IAAFEAFENL
ILGYGFGTEA YLQTNPVAVT NKVESTLVSF GYMEAPVDDK AMNSTDWDTV FSSMLNHTDA
SHVLNIATVR NSHFVSLDYG TADQTLTGVF SGDAVMIFDN TSGEEVPTEC WNEPMKKWIN
ASRNDQGYVL KEPVIEGNQL KTVYAGTEVP VEINFHKYQN TAADWQDLLA NLPSDLKLAS
LSWPAQIYRM DIKQTADVLC REEDPTTYET GVETASELST GLIVELLWPF AYPESYVEDS
TNKFTILDSF GQPESQHEWS ISTSPNGGKL LTITEIVEDP IASQMVQPSY YLVTSNLLTE
VELNTAFDTT DNKQLYRFTY DQSFSNTLHN HFKSLAK