Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0144 |
Symbol | |
ID | 4257060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 163483 |
End bp | 165216 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120740 |
Product | hypothetical protein |
Protein accession | YP_736207 |
Protein GI | 114045657 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAC CTAAACTGCT CTCTTTGCTA ATCGCCACCA GTTTGCTGAC GGCATGTTCT GGCTCAGACG ATAAAGATGA CACCACCACG ACGCCAGAGC CGACGCCTCC TACAGAATAC ACACATAAAG TCACAGGTCA GGTCACTTAT ATCGGCGCTA TCGCCGGGGC CAACGTGTGC GTCGATCTCA ACCAAGACTT AAGCTGCTCA GAGGGTGAAC CGAGCACCAC TACGGACACT GACGGTAAGT ATCAAATCGA TTGGAAAAGC GAGACCGAAA AACCTAACTA TTACCTGTTG GCCAATTGGA TTGATAACGC GGCGTCATCT GCACGCTCAG CATTGGCGAT GAGCTCCGCC GCAGCTAACA CCAACGCCAC CACTGGCGGC ATGAATATCG TTGCCCTGCC CGATCATGCG GGTCATATCA ACGCGCTGAC CAATATTGAG TTTTCACGCT ATCGCAAGAT GATTGAGGCC GACTTAACGC CACAGCAAGT GATTGAGTTC CGCGCCAAAC TCAAATCCTT ATACGCCACT GGATTTAAAC AAGTCGAAGC CGATTTATTT AGTCTTTCGC CCGAAATCAC TCTGCAACCC ACATTTCTCG ACACCCTGCT GTTACACGAT TACCTGTTAA ACCTCACCAA TGAGCGCACA GTGGAAATTT TGGCGGCTAT CGAAGTGTTA ATCGCCGCAT TTGAAGCCTT CGAGAATTTA ATCCTAGGGT ATGGTTTTGG CACTGAGGCT TATCTGCAAA CTAATCCCGT TGCCGTCACC AATAAGGTGG AGAGCACATT AGTGTCCTTC GGTTATATGG AAGCGCCGGT TGATGACAAG GCGATGAACA GCACTGACTG GGATACAGTG TTTAGCAGCA TGCTCAATCA TACCGACGCA TCTCATGTGC TCAATATCGC CACCGTTCGC AACAGCCACT TTGTCAGCTT AGATTACGGT ACTGCTGACC AAACTCTTAC GGGGGTATTT TCAGGTGACG CTGTGATGAT CTTCGACAAC ACGTCAGGAG AGGAAGTCCC TACCGAATGC TGGAATGAGC CGATGAAGAA ATGGATCAAT GCCTCGCGTA ACGACCAAGG GTATGTCCTT AAAGAACCTG TGATTGAAGG CAATCAATTA AAAACCGTTT ATGCCGGCAC TGAAGTCCCT GTCGAAATAA ATTTCCATAA GTATCAAAAC ACGGCCGCTG ACTGGCAAGA TTTGCTGGCA AACCTCCCGA GCGACCTCAA ACTGGCGTCA CTCAGCTGGC CTGCGCAAAT ATATCGCATG GATATTAAAC AAACGGCCGA CGTGTTATGC CGCGAAGAAG ATCCCACCAC CTATGAAACG GGCGTTGAAA CCGCGAGCGA GCTTTCTACT GGCTTGATCG TGGAGCTATT GTGGCCCTTC GCTTACCCCG AGAGTTACGT TGAGGACTCA ACGAATAAAT TCACCATTCT CGATAGCTTC GGTCAGCCTG AAAGCCAACA TGAATGGAGC ATTAGCACCA GTCCAAATGG CGGCAAGCTG CTAACTATCA CTGAAATTGT GGAGGATCCG ATTGCGAGCC AGATGGTGCA ACCGAGCTAC TACCTTGTGA CCTCAAACTT GCTGACTGAA GTTGAGCTAA ACACGGCATT TGATACGACT GACAATAAAC AGTTATATCG CTTTACCTAC GATCAAAGCT TCAGCAATAC CCTGCACAAC CACTTTAAGT CGCTAGCAAA GTAA
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Protein sequence | MFKPKLLSLL IATSLLTACS GSDDKDDTTT TPEPTPPTEY THKVTGQVTY IGAIAGANVC VDLNQDLSCS EGEPSTTTDT DGKYQIDWKS ETEKPNYYLL ANWIDNAASS ARSALAMSSA AANTNATTGG MNIVALPDHA GHINALTNIE FSRYRKMIEA DLTPQQVIEF RAKLKSLYAT GFKQVEADLF SLSPEITLQP TFLDTLLLHD YLLNLTNERT VEILAAIEVL IAAFEAFENL ILGYGFGTEA YLQTNPVAVT NKVESTLVSF GYMEAPVDDK AMNSTDWDTV FSSMLNHTDA SHVLNIATVR NSHFVSLDYG TADQTLTGVF SGDAVMIFDN TSGEEVPTEC WNEPMKKWIN ASRNDQGYVL KEPVIEGNQL KTVYAGTEVP VEINFHKYQN TAADWQDLLA NLPSDLKLAS LSWPAQIYRM DIKQTADVLC REEDPTTYET GVETASELST GLIVELLWPF AYPESYVEDS TNKFTILDSF GQPESQHEWS ISTSPNGGKL LTITEIVEDP IASQMVQPSY YLVTSNLLTE VELNTAFDTT DNKQLYRFTY DQSFSNTLHN HFKSLAK
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