Gene Shewmr7_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0087 
Symbol 
ID4255812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp98910 
End bp99923 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content45% 
IMG OID638120682 
Producthypothetical protein 
Protein accessionYP_736150 
Protein GI114045600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGA TTGAATTTGA TATTCCCGAA GATCACCGTA TTCCCTTTCA GAAGTATTAC 
AAACAAAAAA TCGCCCCTAA ATGCGCCCCC TTTGAAGCAA AACGTGAAGG CGTGAATCAA
AGGCGGCGTG AAAATGCCAA GTTCACCACC CCAATCTACT ACATATGCAT CACGGTGATT
TTGGTCGCCT TCGCTGGGTT GCTCGGGGTG CAGTTTATGC TGGTGCCTAT GGATTATTTT
GTGCCTTTGA TGATTGGCGC GTTTCTGCCG ACTCCCGTGA TAGCGTTAGT GGCGATTGCC
TCGGGAAAGG AAAGCAATGA ACTCTATAAT GCCGCCTTTG AAAAACTCTA TCCCATCAGT
CTCAAGTACT TCGGCAATGA TTATGCGTTA ACGAGGGAGC CTAAGGTGGA TTTCTCAACC
TTCCTTGAGT TGGGGCTGCT GCCTAAAACC GATAAACAGT ATGCGCAAAA TTGCCTTAAG
GGAACCTATA ACAAGGTGCC GTTCCAGTTT TATGAGGTCG ATGCTTACAA CACTAAATCG
AACAATAATG GCTCGGTTGA GCGAGAGACC ATCTTCAATG GTGTGCTACT GGTATGCAAT
ATTCCTAAGC GATTCAACGG CACGACCTTG TTAGTCACGG ATAAGGGCAG TTTAAAAAAT
CGTATTGAGG GGTTTAAGAC AAAGCTATCG CGGGTCAAGC TTGAGGATGT GCGTTTTGAG
CGTTGTTTTG AGGTGTATAG CAGTGACCAA GTCGAGGCGC GCTACTTACT CAATCCCTTG
ATGATGGAAA ATCTCTTGGC CCTAGGCCGC GAGCTAAATG CCGAGGTAGA AGCCTGTTTC
TATCAAAAAC AATTGCTGAT TAAGATCCCG ACAAAACACC ATTTCTTTAT TAATCAACTC
GATTTAGATC GCCCCATCGA TTTTAAGCTC AATATTGAGC GGATGTTTAC CGAGTTAGGT
TATACCTTCT CGATCATCGA TACTTTAAAA CTTGATAAAC ATACCGGGTT ATAG
 
Protein sequence
MSSIEFDIPE DHRIPFQKYY KQKIAPKCAP FEAKREGVNQ RRRENAKFTT PIYYICITVI 
LVAFAGLLGV QFMLVPMDYF VPLMIGAFLP TPVIALVAIA SGKESNELYN AAFEKLYPIS
LKYFGNDYAL TREPKVDFST FLELGLLPKT DKQYAQNCLK GTYNKVPFQF YEVDAYNTKS
NNNGSVERET IFNGVLLVCN IPKRFNGTTL LVTDKGSLKN RIEGFKTKLS RVKLEDVRFE
RCFEVYSSDQ VEARYLLNPL MMENLLALGR ELNAEVEACF YQKQLLIKIP TKHHFFINQL
DLDRPIDFKL NIERMFTELG YTFSIIDTLK LDKHTGL