Gene Shewmr7_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0082 
Symbol 
ID4255807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp95862 
End bp96215 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content49% 
IMG OID638120677 
ProductMerR family transcriptional regulator 
Protein accessionYP_736145 
Protein GI114045595 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATTG GTGCTGTGGC GAAGCAAACG GGCCTGTCGA TCAAGGCGAT TCGCCTCTAC 
GAGGAGTGGG GACTGATCAG TGCGCCGATC CGTAAGGGGC GTTATCGCAC TTATAGCGCA
ACCGATATAA AGCAGTTATT GCTGATCAAA GAGGCCAAAA CCTTAGGTAT CAAACTCTCG
CAACTTAAAG ACTTGTTTAC CGAGGGGGAG CAGGCGGCGC AGCTTGAGTC TGTGCAGCAG
TTTTTATTGA ATATCAAAGC CGATTTCCAG CGGCAGATTA GCGAATTAGA AGATAAATTA
GTCAGGCTCG ATGCCTGTAT TGATGGTTTG GATACCTGCG AATCCCGCGC CTAA
 
Protein sequence
MYIGAVAKQT GLSIKAIRLY EEWGLISAPI RKGRYRTYSA TDIKQLLLIK EAKTLGIKLS 
QLKDLFTEGE QAAQLESVQQ FLLNIKADFQ RQISELEDKL VRLDACIDGL DTCESRA