Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0081 |
Symbol | |
ID | 4255806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 95250 |
End bp | 95714 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638120676 |
Product | thioesterase superfamily protein |
Protein accession | YP_736144 |
Protein GI | 114045594 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATG CAATGGAAAG TCCAACACTA AGTCCAATGG AAAAGTTTCT CGCACAGCAC CCTATAGTGA CCGAAATCCC CGTGGCTTGG GGCGAAATGG ATGCGCTGCA ACACGTCAAC AACGTGGTCT ATTTCCGCTA TTTTGAAACC GCACGTATCG ACTTTTTCAA CCGCCTTTTT CCACTCGATG CCCTGTATAA ATCCGGTGTT GGTCCAGTGA TTAGCGAAAA TCAGGCCCGC TATAAACGTC CAGTAACCTT CCCCGATACC CTATTGGTCA GCGTGAGTAT CAGCGATATT CAAAGCGACA GATTTACCAT GCATTATCAG GCCTTTAGTA AGCAGCAACA GGCCATCACG ACCTTAGGTA CTTCGGTCGC AGTGATGTTT AACTTTAAAA CTGGTCAAAA AGCAGAGCTT CCCACGGAAT TACTCGCCAT TCTTAAACAA CACGAGCAAG CTTAA
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Protein sequence | MSNAMESPTL SPMEKFLAQH PIVTEIPVAW GEMDALQHVN NVVYFRYFET ARIDFFNRLF PLDALYKSGV GPVISENQAR YKRPVTFPDT LLVSVSISDI QSDRFTMHYQ AFSKQQQAIT TLGTSVAVMF NFKTGQKAEL PTELLAILKQ HEQA
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