| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0046 |
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| Symbol | gpsA |
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| ID | 4254939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 53774 |
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| End bp | 54790 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120641 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_736109 |
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| Protein GI | 114045559 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00306361 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAACT CTGCCGATAT CACGGTGTTA GGGGCGGGCT CTTATGGCAC CGCCCTTGCC
ATCTCTCTAG CCAGCAATGG TCATAAGACC TTGTTGTGGG GGCACGATCC TGCCCATATG
CAAACGCTCG CTCAGGACAA ATGCAACCAA GCATTCCTGC CTGGTATTGC CTTCCCCGAG
TGTTTACATA TCGAAGCCGA CTTAGCCAAA GCCTTAGCGG CCAGCAATAA TGTGCTGGTT
GTGGTACCTA GCCATGTGTT TGGCTCGGTA CTGGCCCAAG CGAAACCTTT GTTACGCCAA
GATGCTCGCA TCGTATGGGC GACCAAAGGA CTCGAGCCTG AAACCGGACG TTTGCTGCAA
GATGTGGCCC GTGATGTGTT AGGCGAGCAA TATCCGCTGG CGGTATTGTC AGGACCTACG
TTTGCGAAGG AATTAGCCAT GGGGTTACCT ACGGCGATTT CGGTTGCGGG CACTTGTCCT
AAATTTACCG CTGAGCTAGT GGAATTGCTG CACAGCCCTA AACGTTTACG CGTTTACGCT
AACGACGACT TTATCGGCCT GCAATTAGGC GGCGCGGTGA AGAACGTTAT CGCCATTGGT
GCGGGGATGT CCGACGGTAT TGGCTTTGGT GCTAATGCCA GAACGGCGTT AATTACCCGT
GGTTTAGTCG AGTTAACCCG CTTAGGCGAA GCCTTAGGTG CCAGCACCGC CACCTTTATG
GGCATGGCTG GATTAGGCGA CCTAGTGTTA ACTTGTACCG ACAACCAATC CCGTAACCGC
CGCTTTGGTT TAGCCTTAGG TAAAGGCTGC GATGTGGATA CCGCACAGGC CGAAATCGGC
CAAGTGGTTG AAGGTTATCG CAATACTAAA GAAGTGTTTA CTCTAGCGAA GCGCATGGGC
GTCGAAATGC CGATCACCGA GCAAATCTAC CAAGTGTTAT ACCAAGGCAA AGCGCCCTTG
GATGCCGCCA AAGAACTGCT CAGCAGAGAA AAGAAATCAG AAACGCCAGC GCAATAA
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| Protein sequence | MKNSADITVL GAGSYGTALA ISLASNGHKT LLWGHDPAHM QTLAQDKCNQ AFLPGIAFPE
CLHIEADLAK ALAASNNVLV VVPSHVFGSV LAQAKPLLRQ DARIVWATKG LEPETGRLLQ
DVARDVLGEQ YPLAVLSGPT FAKELAMGLP TAISVAGTCP KFTAELVELL HSPKRLRVYA
NDDFIGLQLG GAVKNVIAIG AGMSDGIGFG ANARTALITR GLVELTRLGE ALGASTATFM
GMAGLGDLVL TCTDNQSRNR RFGLALGKGC DVDTAQAEIG QVVEGYRNTK EVFTLAKRMG
VEMPITEQIY QVLYQGKAPL DAAKELLSRE KKSETPAQ
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