Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0017 |
Symbol | |
ID | 4258050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 22469 |
End bp | 23788 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120608 |
Product | proline dipeptidase |
Protein accession | YP_736080 |
Protein GI | 114045530 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.767781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0779588 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCACT TGGCTCATCA CTATCATGCC CACATCGCCG AGCTTAATCG TCGAGTCGCT GAAATTGTAT CGCGTGAAGC ATTATCAGGT TTAGTGATCC ACTCGGGTCA GCCACATCGA ATGTTTTTGG ACGACATTAA TTATCCTTTT AAAGCCAATC CCCACTTCAA GGCCTGGTTA CCTGTGTTGG ATAACCCTAA CTGCTGGTTA GTGGTGAATG GTCGCGATAA GCCGCAACTG ATTTTTTATC GCCCAGTGGA TTTTTGGCAT AAGGTGTCTG ACGTGCCGGA GATGTTCTGG ACCGAGCATT TTGAGATCAA GTTACTCACT AAGGCCGATA AGGTTGCCGA GCTATTGCCT AGCGATATCA CCAACTGGGC TTATTTAGGT GAGCATTTAG ATGTGGCTGA GGTACTGGGT TTCACCAGTC GCAATCCAGA CTCTGTGATG AGCTACCTGC ATTTCCACCG CACTACTAAA ACCGAATATG AACTCGAATG TATGCGCCGT GCGAACCAGA TTGCAGTGCA AGGGCATTTA GCGGCTAAAA ATGCCTTCTA TAACGGTGCC AGCGAGTTTG AAATTCAGCA GCAGTATTTA TCTGCCGTGG GACAGGGCGA TAACGAAGTG CCCTACGGTA ATATCATTGC CTTAAACCAA AATGCGGCGA TTTTGCATTA CACCGCGCTT GAGCATCAAA ATCCGGCGCG GCGTTTATCT TTTTTAATCG ATGCGGGCGC CAGTTACTTT GGCTACGCGT CGGATATTAC TCGTACCTAT GCGTTTGAGA AGAATCGCTT CGATGAATTG ATCACGGCCA TGAACAAGGC GCAGCTCGAA CTGATCGATA TGATGCGCCC AGGTGTGCGT TATCCCGATT TACACTTGGC GACCCATGGC AAAGTCGCGC AAATGCTGTT GGATTTTGAG CTAGCCACGG GCGATGCCCA AGGCTTAGTC GACCAAGGTA TTACCAGCGC CTTCTTCCCC CACGGACTCG GCCATATGTT AGGCTTGCAA GTGCATGATG TGGGCGGTTT TTCCTTCGAT GAGCGTGGTA CCCATATTCC GGCACCAGAA GCCCATCCAT TCCTGCGTTG CACACGCATT TTAGCGCCAA ACCAAGTGCT AACGATGGAG CCAGGGTTGT ACATTATCGA CACTTTACTC AATGAGCTAA AACAAGATAG CCGTGGCCAG CAGATCAATT GGCGCACCGT TGATGAGCTG CGACCTTTCG GTGGTATTCG TATCGAGGAT AATGTGATTG TGCATCAAGA TCGAAACGAA AATATGACCC GCGAACTGGG CTTAGCGTGA
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Protein sequence | MDHLAHHYHA HIAELNRRVA EIVSREALSG LVIHSGQPHR MFLDDINYPF KANPHFKAWL PVLDNPNCWL VVNGRDKPQL IFYRPVDFWH KVSDVPEMFW TEHFEIKLLT KADKVAELLP SDITNWAYLG EHLDVAEVLG FTSRNPDSVM SYLHFHRTTK TEYELECMRR ANQIAVQGHL AAKNAFYNGA SEFEIQQQYL SAVGQGDNEV PYGNIIALNQ NAAILHYTAL EHQNPARRLS FLIDAGASYF GYASDITRTY AFEKNRFDEL ITAMNKAQLE LIDMMRPGVR YPDLHLATHG KVAQMLLDFE LATGDAQGLV DQGITSAFFP HGLGHMLGLQ VHDVGGFSFD ERGTHIPAPE AHPFLRCTRI LAPNQVLTME PGLYIIDTLL NELKQDSRGQ QINWRTVDEL RPFGGIRIED NVIVHQDRNE NMTRELGLA
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