| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0004 |
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| Symbol | |
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| ID | 4258037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3846 |
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| End bp | 6263 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120595 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_736067 |
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| Protein GI | 114045517 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.666874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0301328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAGA ATAGTTACGA TTCTTCGAGT ATTAAGGTCC TTAAGGGCCT TGATGCAGTA
CGTAAGAGAC CTGGGATGTA TATTGGTGAC ACCGACGACG GTACGGGTCT ACATCATATG
GTGTTCGAAG TAGTCGATAA CTCTATCGAT GAAGCCTTAG CCGGCCATTG TACTGATATC
ACTATTACTA TCCATGTGGA TGGTTCGGTC TCCGTTCGCG ACGACGGCCG TGGTATTCCT
GTGGCGATTC ACCCGGAAGA AGGCGTGTCT GCCGCCGAGG TGATCATGAC GGTACTGCAC
GCGGGCGGTA AGTTCGACGA TAACTCTTAT AAAGTGTCAG GTGGTCTGCA CGGCGTGGGT
GTATCGGTAG TTAACGCGCT GTCTAAAAAG CTGCAGTTAA CCATTCGCCG CGAAGGAAAA
GTCCACGAGC AGTTTTATAC CCACGGTGTA CCTGACGAGC CAATCAAAGT GATCGGCGAT
GCGACTAAAA CCGGTACCGA AATCCGTTTC TGGCCAAGTG AAGAAACCTT CAGCGATGTT
GAGTTCCACT TCGAGATTCT GGCAAAGCGC GTGCGCGAAC TATCATTCCT CAACTCAGGC
GTGGGTATCC GCTTAGTCGA CGAGCGTGAC AATAAGAATG AATTCTTTAA ATACGAAGGC
GGTATCAGCG CATTCGTTGA TTACCTAAAC CGTAATAAAA CGCCAGTAAA CAAAGACGTA
TTCCACTTTA TGCAAGAGCG TGAAGATGGC ATTACCGTTG AAGTGGCGAT GCAGTGGAAC
GATGGTTATC AAGAAAGCAT TTTCTGTTTT ACCAACAACA TTCCACAGCG CGATGGTGGT
ACTCACTTAG CAGGTTTCCG TAGTGCGTTG ACACGTAACC TCAACAACTA CATGGAAAAC
GAAGGCTATA ACAAGAAAGG CAAAACTAAC GCGACAGGCG ATGACGCCCG CGAAGGTTTA
ACGGCCGTGA TTTCAGTTAA AGTGCCTGAT CCTAAGTTCA GCTCGCAAAC TAAAGACAAG
TTAGTCTCTA GCGAAGTGAA AGCCGCGGTT GAACAAACCA TGGGTGAAAA GCTAAACGAC
TATCTGCTGG AAAACCCTGC CGATGCCAAG TTAATCGTCG GTAAGATTGT CGATGCGGCC
CGTGCCCGTG AAGCGGCGCG TAAAGCCCGT GAAATGACCC GCCGTAAAGG TGCTCTCGAT
TTAGGTGGTT TGCCAGGTAA GCTGGCGGAT TGCCAAGAGA AAGACCCTGG TCTTTCTGAA
ATCTACATAG TGGAAGGGGA CTCTGCTGGC GGTAGCGCTA AGCAGGGACG TAACCGTAAG
AACCAAGCGA TTCTGCCACT GAAAGGTAAA ATCTTAAACG TTGAGAAAGC GCGTTTCGAT
AAAATGCTTT CTTCTCAAGA GGTTGCGACT CTTATTACCG CACTTGGCTG TGGTATTGGT
CGTGACGAAT ACAACCCGGA TAAGACGCGT TACCACAACA TCATTATCAT GACGGATGCT
GACGTCGACG GCTCGCACAT TCGTACCTTG CTGTTGACCT TCTTCTTCCG CCAAATGCCT
GAACTGATTG AACGTGGTTA TGTGTATATT GCTCAGCCGC CTTTATTCAA AGTGAAGAAA
GGCAAGCAAG AACAATATCT CAAAGACGAA GCGGCACTGA CTCAGTATCT GACGACTCAA
GCGTTAGATG GTACTAGCAT TTACCCATCT CAAGGTGCAC CTGGCATGTC GGGTGAGCCA
TTAGAGCGTT TAGTGACTCA ATACCGTGAA GTGGAAGCGA TTGTGGCCCG TTTAGAGCAA
CGTTACCCAA CGCAGATCAC CAACCGCATG CTTTATCATC CAATGATCAA CAACGAGATG
TTGGCGGATG AAGGCAAGAT GAAGGAATGG ATCGACGCCT TTATCCATGA GCTGGTGGAA
TTAGAAAACA GTGGTGTATT GTATTCTGGT GAGCCTGTAC TCGATCCTGA GCGTAAAGTG
TATCTGCCGA AGATCACTAT CCGTAAACAC GGTATCGATA CACACTACCT GTTCAGCTAT
GACTTCTTCC AATCAACTGA CTACCAACGC ATTGGTAAGT TAGGCGCTGC GCTCGAAGGC
CTGATTGAAG TCGGTGGCTA CGTACAGCGT GGCGAACGTG TGAAGGAAGT GGGTAGCTTT
ATAGAAGCTT TAGATTGGAC CATCGGCGAA GCCAAGCGTG GCCTCTATAT CCAACGCTAT
AAAGGATTGG GTGAGATGAA CCCTGAGCAA TTGTGGGAAA CTACAATGGA TCCTGAATCA
CGCCGTATGC TGCAAGTGAC GATTGATGAT GCCGTTGGTG CGGATCAGCT GTTTACTTGT
TTGATGGGCG ACCAAGTTGA ACCACGCCGT GACTTTATCG AAGCCAACGC GCTGAACGTG
GCAAACTTAG ACGTTTAA
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| Protein sequence | MSENSYDSSS IKVLKGLDAV RKRPGMYIGD TDDGTGLHHM VFEVVDNSID EALAGHCTDI
TITIHVDGSV SVRDDGRGIP VAIHPEEGVS AAEVIMTVLH AGGKFDDNSY KVSGGLHGVG
VSVVNALSKK LQLTIRREGK VHEQFYTHGV PDEPIKVIGD ATKTGTEIRF WPSEETFSDV
EFHFEILAKR VRELSFLNSG VGIRLVDERD NKNEFFKYEG GISAFVDYLN RNKTPVNKDV
FHFMQEREDG ITVEVAMQWN DGYQESIFCF TNNIPQRDGG THLAGFRSAL TRNLNNYMEN
EGYNKKGKTN ATGDDAREGL TAVISVKVPD PKFSSQTKDK LVSSEVKAAV EQTMGEKLND
YLLENPADAK LIVGKIVDAA RAREAARKAR EMTRRKGALD LGGLPGKLAD CQEKDPGLSE
IYIVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKTR YHNIIIMTDA DVDGSHIRTL LLTFFFRQMP ELIERGYVYI AQPPLFKVKK
GKQEQYLKDE AALTQYLTTQ ALDGTSIYPS QGAPGMSGEP LERLVTQYRE VEAIVARLEQ
RYPTQITNRM LYHPMINNEM LADEGKMKEW IDAFIHELVE LENSGVLYSG EPVLDPERKV
YLPKITIRKH GIDTHYLFSY DFFQSTDYQR IGKLGAALEG LIEVGGYVQR GERVKEVGSF
IEALDWTIGE AKRGLYIQRY KGLGEMNPEQ LWETTMDPES RRMLQVTIDD AVGADQLFTC
LMGDQVEPRR DFIEANALNV ANLDV
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