Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0002 |
Symbol | |
ID | 4258035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1484 |
End bp | 2584 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638120593 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_736065 |
Protein GI | 114045515 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000472427 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00139326 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTTT CAATTGATAG GGACGCCCTA TTAAAGCCGC TTCAATTGGT TTGTGGTGCG GTAGAAAGAC GCCATAACTT GCCTATTTTG GCAAATCTCC TTGTAGAAGT TAGTGGTCAC TCACTCAAAA TGACAGGTAC CGACCTCGAA GTTGAGTTAG TGGGTCAGGC GGTTGTTCAT GGTGATATCG AAGAGGGTCG CACAACAGTT CCTGCGAAGA AACTGTTAGA CATAGTTAAA TCCTTACCCG AGCAAAGCGA GCTTAAGGTC GAGCAACAAG ATAACAAATG GTTGTTACGC TCTGGCCGTA GCCGTTTCTC ACTGGCAACC CTGCCCGCAG AAGAATACCC CAATGTGGAA GCCTTTCAGG CGGAAATCGA ATTTACCCTT AAGCAGGGCG TGCTGAAGTC GCTGATTGAT GCGACTCAGT TTTCGATGGC GAACCAAGAC GTTCGTTACT ATCTGAATGG TTTATTGCTC GAAACCGAAG GTAATGTGCT GCGTGCCATT GCCACCGACG GTCACCGCTT AGCCTTAAGC CACAGAACCA TAGATGCGCA ATTACCTGAA AAACAAGTGA TCGTGCCCCG TAAAGGCGTG ATGGAAATGG CGCGTTTGTT GGAAGCCGAT GATTTAGATA TCGCTATTGC CATTGGTGAT AATGCGATTC GTGCGACCAC CAGCACCACA GTCTTTACCA GCAAATTAGT CGATGGTCGT TTCCCCGATT ATCGCCGTGT GTTACCTAAG GGCGGTGATA AAATCGTTAT CGCCAGCCGT AACCACTTTA AGCAAGCCTT AACCCGTGCC TCTATTTTAT CGAATGAGAA GTTTCGCGGT GTACGCATTC AGTTAGAAGC GGGATTACTG AAAATCACCG CCAATAACCC AGAGCAGGAA GAAGCGGAAG AAATCATCGA TGTGGATTAT AACAATCAGC CACTCGAAAT TGGTTTCAAC GTCAGTTACT TATTGGATGT GCTAAACAAT CTTAAGTCCG ATGATGTGCG TATCACCTTA ATCGATGGTA ACTCGAGTGC TTTATTGGAA AACCACTTGG AAGAAGATTC CATGTATGTG GTTATGCCGA TGCGCTTATA G
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Protein sequence | MKFSIDRDAL LKPLQLVCGA VERRHNLPIL ANLLVEVSGH SLKMTGTDLE VELVGQAVVH GDIEEGRTTV PAKKLLDIVK SLPEQSELKV EQQDNKWLLR SGRSRFSLAT LPAEEYPNVE AFQAEIEFTL KQGVLKSLID ATQFSMANQD VRYYLNGLLL ETEGNVLRAI ATDGHRLALS HRTIDAQLPE KQVIVPRKGV MEMARLLEAD DLDIAIAIGD NAIRATTSTT VFTSKLVDGR FPDYRRVLPK GGDKIVIASR NHFKQALTRA SILSNEKFRG VRIQLEAGLL KITANNPEQE EAEEIIDVDY NNQPLEIGFN VSYLLDVLNN LKSDDVRITL IDGNSSALLE NHLEEDSMYV VMPMRL
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