Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_R0017 |
Symbol | |
ID | 4254523 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 255305 |
End bp | 258197 |
Gene Length | 2893 bp |
Protein Length | |
Translation table | |
GC content | 52% |
IMG OID | 640717218 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000288824 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GGTTAAGCGA CTAAGCGTAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAGGACGTA GTAACTTGCG AAAAGCGTTG GCGAGCTAGT AACAAGCATT TGAGCTAACG ATGTCCGAAT GGGGGAACCC AGCAGCATAA GCTGTTATCA CTGCATGAAT ACATAGTGTA GTGAGGCAAA CGAGGGGAAC TGAAACATCT AAGTACCCTT AGGAAAAGAA ATCAACCGAG ATTCCCCTAG TAGCGGCGAG CGAACGGGGA TTAGCCCTTA AGTCAGAGGG GTGTTAGTGG AATGGTCTGG AAAGTCCAGC GGCACAGGGT GATAGCCCCG TACACGAAAA CTAACCTTTG ATGAAAACGA GTAAGGCGGG ACACGTGATA TCCTGTTTGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT ACTCCTGACT GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCTGTG AGGGGAGTGA AATAGAACCT GAAACCGTAT ACGTACAAGC AGTGGGAGCG GTACTTGAGA CCGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA CGTTTTGTAG CGAGGTTAAG CGAATAGCGG AGCCGTAGGG AAACCGAGTG TTAACTGCGC GTTTAGTTGC AAGGCGTAGA CCCGAAACCC GGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA CCGAACCGAC TAATGTTGAA AAATTAGCGG ATGACTTGTG GCTGGGGGTG AAAGGCCAAT CAAACCGGGA GATATCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GGACGAACAC CTTTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA ACTCCGAATA CCAAAGAGTG CTATCCGGGA GACAGACGGC GGGTGCTAAC GTCCGTCGTC AAAAGGGAAA CAACCCAGAC CGTCAGCTAA GGTCCCAAAG TGTATGTTAA GTGGGAAACG ATGTGGGAAG GCTTAGACAG CTAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG CGTAATAGCT CACTAGTCGA GTCGGCCTGC GCGGAAGATG TAACGGGGCT AAACATACCA CCGAAGCTAC GGGTGCAATC CATTAGGGTT GCGCGGTAGA GGAGCGTTCT GTAAGCCGTT GAAGGTGAAG GGGTAACCCA CGCTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC GATAAAGGGG GTGAAAAACC CCCTCGCCGA AAGACCAAGG GTTCCTGTCC AACGTTAATC GGGGCAGGGT GAGTCGACCC CTAAGGCGAG GCCGAAAGGC GTAGTCGATG GGAAACAGAT TAATATTTCT GTACTTCCGC TAACTGCGAT GGAGAGACGG AGAAGGCTAG GCTAGCGCGG CGTTGGTAGT CCGCGTTTAA GGTGGTAGGT GGGTGACTTA GGCAAATCCG GGTCACTATA CACTGAGAGC TGATGACGAG TCCCCAAGGG GATGAAGTAG TTGATGCCAT GCTTCCAGGA AAATCTTCTA AGCTTCAGGT TAGCGGGAAT CGTACCCCAA ACCGACACAG GTGGTCGGGT AGAGAATACC AAGGCGCTTG AGAGAACTCG GCTGAAGGAA CTAGGCAAAA TGGTACCGTA ACTTCGGGAG AAGGTACGCT GCTGTTGGTG ATGGGACTTG CTCCCTAAGC TGACGGCAGT CGCAGATACC AGGTGGCTGC AACTGTTTAT CAAAAACACA GCACTGTGCA AAATCGCAAG ATGACGTATA CGGTGTGACG CCTGCCCGGT GCCGGAAGGT TAATTGATTG GGTTATCGCA AGAGAAGCTC ATGATCGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAATGA TGGCCACGCT GTCTCCAGCC GAGACTCAGT GAAGTTGAAA TTGCGGTGAA GATGCCGTAT ACCCGCGGCT AGACGGAAAG ACCCCGTGAA CCTTTACTAT AGCTTGGCAC TGAACATTGA CCCTACATGT GTAGGATAGG TGGGAGACTT TGAAGTTGGA ACGCTAGTTC TGATGGAGTC GTCCTTGAAA TACCACCCTT GTAGTGTTGA TGTTCTAACT TGGGCCCCTA ATCGGGGTTA AGGACAGTGC CTGGTGGGTA GTTTGACTGG GGCGGTCTCC TCCCAAAGAG TAACGGAGGA GCACGAAGGT TGGCTAAGTA CGGTCGGACA TCGTACGGTT AGTGCAATGG CATAAGCCAG CTTAACTGCG AGACAGACAC GTCGAGCAGG TACGAAAGTA GGTCATAGTG ATCCGGTGGT TCTGAATGGA AGGGCCATCG CTCAACGGAT AAAAGGTACT CCGGGGATAA CAGGCTGATA CCGCCCAAGA GTTCATATCG ACGGCGGTGT TTGGCACCTC GATGTCGGCT CATCACATCC TGGGGCTGAA GTCGGTCCCA AGGGTATGGC TGTTCGCCAT TTAAAGTGGT ACGCGAGCTG GGTTCAGAAC GTCGTGAGAC AGTTCGGTCC CTATCTGCCG TGGGCGTTGG ATGATTGAGG GGAGTTGCTC CTAGTACGAG AGGACCGGAG TGAACGAACC GCTGGTGTTC GGGTTGTCAT GCCAATGGCA TTGCCCGGTA GCTATGTTCG GAATCGATAA CCGCTGAAAG CATCTAAGCG GGAAGCGAGC CCCAAGATGA GTCATCCCTT GGACTTTAAG TCCACTAAAG AGCCGTTCGA GACTAGGACG TTGATAGGTC AGGTGTGTAA GCGTTGTGAG GCGTTGAGCT AACTGATACT AATGACTCGA GAGGCTTAAC CAT
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Protein sequence | |
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