| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3926 |
|---|
| Symbol | |
|---|
| ID | 4254489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4689735 |
|---|
| End bp | 4690595 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638120574 |
|---|
| Product | F0F1 ATP synthase subunit gamma |
|---|
| Protein accession | YP_736046 |
|---|
| Protein GI | 113972253 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0224] F0F1-type ATP synthase, gamma subunit |
|---|
| TIGRFAM ID | [TIGR01146] ATP synthase, F1 gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0151419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCG CTAAAGAGAT TAAAACCAAG ATCGCGAGTG TGAAAAACAC TCAGAAGATC
ACGTCCGCCA TGGAAATGGT GGCAGCCAGC AAAATGCGCA GAGCGCAGGA CCGCATGGCT
GCAAGCCGTC CATACGCGGA AAGCATGCGT AAGGTGATCG GTCACGTCGC GCAAGGTTCT
CTCGAGTATA AACACCCCTA CTTAGAGGTG AGAGAGGCTA AGCGGGTTGG TTACATTGTT
GTAGCAACCG ACCGTGGCCT TTGTGGTGGT CTGAACGTCA ACCTCTTTAA AAAGGTTGTG
GCAGACGTGA AAAGCTGGAA AGAGCAAGGT GCAGAATTTG AATTTTGCCC AATTGGTGCT
CGTAGTGTTC AGTTTTTCAA AAGCTTTGGC GGTCAGGTAT CTGCCCATGC TTCAGGTTTA
GGCGATGCTC CAAAGCTCGC TGACCTGATC GGGACAGTAC GTGTGATGCT AGATGCTTAC
AACGAAGGCA AACTGGATCG TCTGTACGTA GTGTTCAACA AGTTTGTAAA CACTATGACG
CAGACTCCTG TGATCGAGCA GCTGCTACCT TTGCCTAAAT CGGAAGATGA TGAGGTTGCT
CATCGTTGGG ACTATATCTA CGAGCCAGAT CCAAAAGCCC TTTTGGATAC CTTATTGGTT
CGTTATGTAG AATCTCAGGT TTACCAAGGT GTTGTTGAAA ACATTGCTTC TGAACAGGCT
GCCCGTATGG TGGCAATGAA GGCGGCAACA GACAACGCAG GTACACTGAT TGACGATTTG
CAATTGGTCT ATAACAAGGC TCGTCAGGCT GCGATTACGC AGGAACTGTC GGAAATTGTT
TCTGGTGCCT CTGCGGTTTA G
|
|---|
| Protein sequence | MAGAKEIKTK IASVKNTQKI TSAMEMVAAS KMRRAQDRMA ASRPYAESMR KVIGHVAQGS
LEYKHPYLEV REAKRVGYIV VATDRGLCGG LNVNLFKKVV ADVKSWKEQG AEFEFCPIGA
RSVQFFKSFG GQVSAHASGL GDAPKLADLI GTVRVMLDAY NEGKLDRLYV VFNKFVNTMT
QTPVIEQLLP LPKSEDDEVA HRWDYIYEPD PKALLDTLLV RYVESQVYQG VVENIASEQA
ARMVAMKAAT DNAGTLIDDL QLVYNKARQA AITQELSEIV SGASAV
|
|---|
| |