Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3925 |
Symbol | |
ID | 4254488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4688308 |
End bp | 4689699 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120573 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_736045 |
Protein GI | 113972252 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0179078 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAG GTACTGTTGT CCAAGTGATT GGCGCGGTTG TGGACGTAGA GTTTCCACAA GATGCCGTAC CTCAGGTATA TGACGCTCTG AAGATCGTAG GTGAAGGCTC CTGTAATGGT TTGGTGCTGG AAGTTCAGCA ACAACTAGGT GGTGGTGTAG TTCGTACCAT CGCTATGGGT ACTTCTGATG GTCTGCGTCG TGGTCTTGAG GTAGTAAACT CAGGTTCACC TATTTCTGTT CCTGTTGGTA CCGCCACTCT TGGCCGTATC ATGAACGTTT TAGGCGAGCC TATTGATGAA GCTGGCGCAA TTGGCGAAGA AGAACGTTAT GTTATTCACC GCAGCGCTCC TTCATACGAA GATCAATCAA ACACGACTGA ACTGTTAGAG ACTGGTATCA AGGTTATCGA CCTTGTATGT CCATTCGCTA AGGGTGGTAA AGTAGGTCTG TTCGGTGGTG CGGGTGTTGG TAAGACAGTT AACATGATGG AACTGATCAA CAACATCGCT AAAGCTCACT CAGGTCTTTC TGTATTCGCC GGTGTAGGTG AGCGTACTCG TGAGGGTAAC GACTTCTACT ACGAGATGAA GGATTCTGGC GTTCTCGACA AAGTAGCCAT GGTATATGGT CAAATGAACG AGCCACCAGG AAACCGTCTG CGTGTAGCAC TGACCGGTCT GACTATGGCT GAAAAATTCC GTGACGAAGG TCGTGACGTT CTGTTGTTCG TTGACAACAT CTACCGTTAC ACCCTAGCCG GTACTGAAGT ATCAGCACTG TTAGGTCGTA TGCCTTCTGC GGTAGGTTAC CAACCAACTC TGGCTGAAGA AATGGGCGTT CTGCAAGAGC GTATTACTTC AACTAAGACT GGTTCTATTA CCTCTGTACA AGCGGTATAC GTACCTGCGG ACGACTTGAC TGACCCGTCA CCAGCAACAA CCTTCGCTCA CTTAGATGCG ACTGTTGTAT TGTCACGTCA AATCGCTTCT CTGGGTATTT ACCCAGCGGT TGACCCACTG GATTCTACTT CTCGTCAATT AGATCCATTA GTGGTTGGTC AAGAGCACTA TGACGTAGCT AACGGTGTAC AAACTGTTCT GCAACGCTAC AAAGAGCTGA AAGACATCAT TGCGATTCTC GGTATGGACG AACTGTCAGA CGACGATAAG ATGACCGTTT CCCGTGCACG TAAGATTGAG CGTTTCTTGT CTCAGCCTTT CCACGTAGCA GAAGTCTTTA CTGGTTCTCC TGGTAAGTAC GTTTCTCTGA AAGACACTAT CCGTGGCTTC AAGGGAATTC TGAGTGGTGA GTTCGATCAC ATTCCAGAAC AAGCGTTCTA CATGGTTGGT TCTATCGACG AAGCTGTCGA GAAAGCTAAC AAAAAGAAAT AA
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Protein sequence | MSTGTVVQVI GAVVDVEFPQ DAVPQVYDAL KIVGEGSCNG LVLEVQQQLG GGVVRTIAMG TSDGLRRGLE VVNSGSPISV PVGTATLGRI MNVLGEPIDE AGAIGEEERY VIHRSAPSYE DQSNTTELLE TGIKVIDLVC PFAKGGKVGL FGGAGVGKTV NMMELINNIA KAHSGLSVFA GVGERTREGN DFYYEMKDSG VLDKVAMVYG QMNEPPGNRL RVALTGLTMA EKFRDEGRDV LLFVDNIYRY TLAGTEVSAL LGRMPSAVGY QPTLAEEMGV LQERITSTKT GSITSVQAVY VPADDLTDPS PATTFAHLDA TVVLSRQIAS LGIYPAVDPL DSTSRQLDPL VVGQEHYDVA NGVQTVLQRY KELKDIIAIL GMDELSDDDK MTVSRARKIE RFLSQPFHVA EVFTGSPGKY VSLKDTIRGF KGILSGEFDH IPEQAFYMVG SIDEAVEKAN KKK
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