Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3923 |
Symbol | |
ID | 4254486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4686308 |
End bp | 4687672 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120571 |
Product | glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase |
Protein accession | YP_736043 |
Protein GI | 113972250 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) |
TIGRFAM ID | [TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.742518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0326769 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTAA ATGTAGTGAT CTTAGCGGCA GGAAAAGGAA CTCGCATGCG CTCGGATCTT CCCAAGGTAT TACATCCTAT CGCCCACAAG AGCATGGTGC AGCATGTTAT CGATACCGCC CACAGTATCG GCAGCGATGC CATTCAACTG GTCTACGGCT ATGGCGCCGA CAAATTAAAA TCCGCACTGG GTGAGCAGCA ATTAAATTGG ATGTTGCAAG CCGAGCAGTT AGGCACTGGC CATGCGGTTG CTCAGGCGAT TCCTAATATC GACGACAATG ACACTGTGCT GATCCTTTAC GGTGATGTGC CCTTGATCCA AGCCTCGACC CTGGAAGCCT TGCTCGCTGC GCGTCCTGAT CATGGCGTGG CGATTTTAAC CGTCAACCTT GTTAACCCGA CAGGCTATGG TCGTATTGTG CGCGAGCAAG GCAAGGTTGT CGGCATCGTC GAGCAAAAGG ATGCCAATGC TGAACAGTTA GCCATCAATG AAATCAATAC CGGCATAATG GCAGTGCCGG GCAAGGCATT AAAAACCTGG CTTGGCCGCC TATCGAATAA CAATGCTCAG GGTGAATACT ACCTGACCGA CATTATCGCC ATGGCCCACG CCGATGGCGT TGAAATTAAT ACCGCTCAGC CACAATCAGC CATCGAGGTG GAAGGTGCTA ATAACCGCGT GCAGCTTGCA CAACTCGAGC GCGCTTATCA GGCCCGTGAA GCCGAAAAGT TAATGATTGC TGGTGCTAAT CTACGTGACC CAAGCCGTAT CGATATCCGT GGTGAAGTGA CCGTGGGTAT GGATGTGATG GTCGATGTTA ACGTGATTTT CGAAGGTAAA GTAGTGATTG GTAATAACGT TAGCATCGGC GCTGGTGCGA TTCTTATCGA CTGCGAAATT GCCGATAATG CCGAAATCAA ACCTTACTCT ATTATCGAAG GCGCTAAGCT AGGCGTTGCC GCCAGTGCGG GGCCTTTTGC CCGTTTGCGC CCTGGTGCCG AACTGATGCA AGATGCGCAT ATCGGCAACT TCGTTGAGAT GAAAAAAGCC GTGTTAGGTG TAGGTTCTAA GGCGGGTCAC TTAGCCTATT TAGGCGATGC GCAAATCGGG GCGGGTGTGA ATATTGGTGC CGGCACTATT ACCTGTAATT ACGATGGTGC CAATAAACAC TTAACCGTGA TTGAAGATAA TGTGTTTGTG GGGAGTGATA CTCAGCTGGT GGCGCCGGTG ACCATTGGTA AAGGCGCGAC GCTCGGTGCG GGGTCAACCA TTACCCGTGA CGTGGGTGAG GATGAGCTAG TGATCACCCG TGTTAAGCAA AAACATCTGA CAGGCTGGCA ACGTCCGGTA AAGATTAAGA AGTAA
|
Protein sequence | MALNVVILAA GKGTRMRSDL PKVLHPIAHK SMVQHVIDTA HSIGSDAIQL VYGYGADKLK SALGEQQLNW MLQAEQLGTG HAVAQAIPNI DDNDTVLILY GDVPLIQAST LEALLAARPD HGVAILTVNL VNPTGYGRIV REQGKVVGIV EQKDANAEQL AINEINTGIM AVPGKALKTW LGRLSNNNAQ GEYYLTDIIA MAHADGVEIN TAQPQSAIEV EGANNRVQLA QLERAYQARE AEKLMIAGAN LRDPSRIDIR GEVTVGMDVM VDVNVIFEGK VVIGNNVSIG AGAILIDCEI ADNAEIKPYS IIEGAKLGVA ASAGPFARLR PGAELMQDAH IGNFVEMKKA VLGVGSKAGH LAYLGDAQIG AGVNIGAGTI TCNYDGANKH LTVIEDNVFV GSDTQLVAPV TIGKGATLGA GSTITRDVGE DELVITRVKQ KHLTGWQRPV KIKK
|
| |