| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3904 |
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| Symbol | |
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| ID | 4254467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4654650 |
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| End bp | 4655306 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120549 |
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| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
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| Protein accession | YP_736024 |
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| Protein GI | 113972231 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000038321 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.271262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TCGCAGTATT GCTCAGTGGG TGCGGTGTTT TCGATGGAAC AGAGATCCAT
GAATCGGTTT TAACGTTATT ATCTCTGTCG AAAGCCGGGG CTCAATATCA ATGTTTTGCT
CCTGATATCA ATCAGATGCA TGTTGTTAAT CACTTCACGG GCGAAGTAGA CAAGACGGCG
ACACGAAATG TGCTGGTTGA ATCGGCACGT ATCGCCCGCG GCGAAGTAAA AGCTACCACC
GAACTCGATA TTACCGATTT CGATGCACTG GTTATCCCTG GCGGATTTGG GGCGGCGAAA
AATCTGTGTA ACTTCGCCAC TAATGGTAGT GAGTGTGAAG TGAATCCACT CGTTACTGAT
TTTATTAATG AATTTATTCT AGCGAAAAAG CCTGTCGGCT TTATTTGTAT CGCGCCTATG
ATGATCCCGC GTTTATATGG ACATGGCGCT AAGGGCACTA TCGGGAATGA TGTGGATACG
GTAGCAGCCT TTAATCTGAT GGGCGGCCAT CATCAGGCGG CGACTGTGCA TGATATCGTG
GTAGATGAGG TGAATAAGAT TGTCAGCACG CCCGCTTATA TGCTTGCGGG GAACATTGCC
GAGGCGCACT CTGGCATCGA GAAGCTGGTT GCCAAAGTAT TAGAGTTGGC CAAGTAA
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| Protein sequence | MKKIAVLLSG CGVFDGTEIH ESVLTLLSLS KAGAQYQCFA PDINQMHVVN HFTGEVDKTA
TRNVLVESAR IARGEVKATT ELDITDFDAL VIPGGFGAAK NLCNFATNGS ECEVNPLVTD
FINEFILAKK PVGFICIAPM MIPRLYGHGA KGTIGNDVDT VAAFNLMGGH HQAATVHDIV
VDEVNKIVST PAYMLAGNIA EAHSGIEKLV AKVLELAK
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