Gene Shewmr4_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3902 
Symbol 
ID4254465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4653429 
End bp4653734 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content46% 
IMG OID638120547 
Productrhodanese domain-containing protein 
Protein accessionYP_736022 
Protein GI113972229 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000421055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.492067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCT TTAAACACCT CAGCGTGAAT CAATTAGTGC AAATGACCGA GTCAAAGTCA 
GTGCAAATCG TCGATATTCG CGATGGTCAC AGCTTTAACA ACGGCCACAT TGATGGCGCA
TTTAATTTGA ATAACGAGAA TCTGGCGCAC TTTATTGGCC AAGCGGATAT GGACAGTCCT
TTAGTGGTGG TTTGCTACCA TGGCATCAGC AGCCAAAATG CCGCGCAATA CCTTTGTGAA
CAAGGCTTTG ATGATGTCTA TAGCCTAGAT GGTGGCTTTA GCGCTTGGCA TGAGGCCAAT
GCATGA
 
Protein sequence
MSSFKHLSVN QLVQMTESKS VQIVDIRDGH SFNNGHIDGA FNLNNENLAH FIGQADMDSP 
LVVVCYHGIS SQNAAQYLCE QGFDDVYSLD GGFSAWHEAN A