Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3881 |
Symbol | |
ID | 4254444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4630989 |
End bp | 4631804 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638120526 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_736001 |
Protein GI | 113972208 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAAT TACCAGAAGT CGAAGTCACC CGTCAGGGCA TAGCCCCACA TCTTGTCGAA CAAACCGTGG TTGACCTCGT AATCCGTAAC GCCTCACTGC GTTGGCCCGT TCCCGAACTT GCCAAACAGA TCATCGGCCA AACCATACGC CAAGTGCGTC GCCGCGCTAA ATATCTGTTA ATCGATACCG ATGCTGGCAC CAGCATAGTG CATTTGGGGA TGTCGGGCAG CTTGCGGATC CTGCCCCATG ACACGCCAGT GGAGAAGCAC GACCATATCG ATCTTGTCCT CGCCAATGGC CGAATTCTGC GATTTAACGA TCCTAGACGT TTTGGCGCTT GGTTATGGTG CCAATTGCCA GAGGAAGCCC ATCCGCTACT GGAAAAACTC GGGCCAGAAC CTTTGACCGA CGCCTTTAAC GTCAATCAGT TAGCTGCCGC ACTGGCGGGC AAGAAGAAGG CCATCAAACT CTGCCTGATG GACAACCATA TTGTGGTGGG TGTGGGAAAT ATTTACGCCA ACGAAGCACT GTTTGCCGCA GGAATACACC CCGAGGCGGA GGCCGGCAAG ATAGATATTG AACGCTTAAC GGTACTGGTT GCCGAGGTCA AACAAATCCT CGCCCACGCC ATCAAACAGG GCGGTACTAC GCTTAAAGAC TTCACCAATG CCGAGGGTAA ACCCGGCTAT TTCGCGCAAA AGCTGCATGT TTACGGCCGC GGCGGCGAAA CCTGCACTCA GTGCGGCAAT CTACTCAGCG AAATCCGCCT AGGTCAACGC ACCACAGTAT TTTGCGGCAT CTGCCAGACG CGTTAA
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Protein sequence | MPELPEVEVT RQGIAPHLVE QTVVDLVIRN ASLRWPVPEL AKQIIGQTIR QVRRRAKYLL IDTDAGTSIV HLGMSGSLRI LPHDTPVEKH DHIDLVLANG RILRFNDPRR FGAWLWCQLP EEAHPLLEKL GPEPLTDAFN VNQLAAALAG KKKAIKLCLM DNHIVVGVGN IYANEALFAA GIHPEAEAGK IDIERLTVLV AEVKQILAHA IKQGGTTLKD FTNAEGKPGY FAQKLHVYGR GGETCTQCGN LLSEIRLGQR TTVFCGICQT R
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