Gene Shewmr4_3841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3841 
Symbol 
ID4254404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4586391 
End bp4586921 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID638120486 
Producthypothetical protein 
Protein accessionYP_735961 
Protein GI113972168 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGT ATTTCCGTTT GTTTTGGTTG TTGTTTTGGC GCACGCGCCA CTGCCGTAAG 
ATTGATTTTT TAGGCACGAG CCGCATTACT TACCGTGCAT TACCTAGCGA TTGCGATATC
AACTTCCATC TGACCAACTC TCGTTATCCG GCGTTTATGG ATCTGGCGCG CACTTATATG
CTGGCCGAAA TGGGGCTGTT GAAGCGTTTC CTCAAATTGA AGTGGATGCC GATTGTTAAC
GCCGCCGAAT TTACCTATAT CCGTGATATC AAGCCCTTAA AAAAGTTTGA GATTGAAACC
AAAGTCGTGG GCTGGGACGA GAAATATTTC TATATTGAAC AACGCTTTGT GAGTGAACGT
GGTTTGCACT GCATAGTGCA TGTGCGTGGT GTGTTTGTCT GTAAAGGTAA GCAAGTTCCC
TTGGATGTGT TAGTCAAAGA GGCGGGTTAT ACCGATCCTG CTCCTGAGTT GCCGCCAGAA
GTCATTAAAT GGAAAGCGTT TTTACAATTG AAGAAAGAAC GCAATCTCTA A
 
Protein sequence
MNLYFRLFWL LFWRTRHCRK IDFLGTSRIT YRALPSDCDI NFHLTNSRYP AFMDLARTYM 
LAEMGLLKRF LKLKWMPIVN AAEFTYIRDI KPLKKFEIET KVVGWDEKYF YIEQRFVSER
GLHCIVHVRG VFVCKGKQVP LDVLVKEAGY TDPAPELPPE VIKWKAFLQL KKERNL