Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3758 |
Symbol | |
ID | 4254321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4492086 |
End bp | 4492910 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120403 |
Product | putative signal transduction protein |
Protein accession | YP_735878 |
Protein GI | 113972085 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCTG CTGCGCTACT GAGTCGAGTC GATGACTTAC CCCGTTTACC TAAAGCCATT AGTGAGCTGC TTGAAGTAGT TAACGATGAT AATGCCACGG TCAAAAATAT TGCGACTAAG GTGTCCCACG ATCCCTTGAT CAGCGCTAAG GTGCTGAGGC TGGCAAATTG CGCCCACTAT GGTCACAGCC GCGAGGTGGG CAGTATTGAC GAAGCCGTTG TGCGCCTTGG CATGCAGACG CTGCGGACGT TAGTCCTAGC GTCGGCGGTG ATGGGCTCAG TGCCTAAATG CCAAGGGGTC GATCTCGCGC AGTTTTGGGG GCAGACCTTT GAAATTGCAC TCTATTGCCA AGAGATGGCC AAACGTTGTG GGGTACAGCC CGATGAGGCC TTTACCTGTG GGATCCTCCA TCGGATTGGT GACTTACTGA TTGCGGCGAT TTCCCCCGAA GATGCCGAGA AGATTACCGA AGCCGTCGCT CAGGGCAAAG ATAAGCATAC GTTTGAGCGT GAACTGCTCG GCTATGACTC GCCCGATATT GGCGCCCTGT TGGCCCAAAA CTGGAAATTC ACCCCCGCGC TGGTGCAGGG GATTCTTTAT CAGGATCACC CCAAGGATTC GAATCCGTTT TCTAAATTGG CCGCCTTGTT GTGCCTCGCC TATAAAGTGC TGGAGGAGTG GGACAGCATA GATGATGACG ATAAAACCAG TTGGTTATCG CAATTAGCGA CCAAGAAGGG CTTAAAGATG GAAATGGGGG GATTGCGAGT CAAGTTAACA GAACTGAGAG GCGCTGGATT CGAAATAGGT AAGGCCCTTG CTTAA
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Protein sequence | MDSAALLSRV DDLPRLPKAI SELLEVVNDD NATVKNIATK VSHDPLISAK VLRLANCAHY GHSREVGSID EAVVRLGMQT LRTLVLASAV MGSVPKCQGV DLAQFWGQTF EIALYCQEMA KRCGVQPDEA FTCGILHRIG DLLIAAISPE DAEKITEAVA QGKDKHTFER ELLGYDSPDI GALLAQNWKF TPALVQGILY QDHPKDSNPF SKLAALLCLA YKVLEEWDSI DDDDKTSWLS QLATKKGLKM EMGGLRVKLT ELRGAGFEIG KALA
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