| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3741 |
|---|
| Symbol | |
|---|
| ID | 4254304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4472195 |
|---|
| End bp | 4473655 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638120386 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_735861 |
|---|
| Protein GI | 113972068 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCT CCTTTGTTAA ATCATCCTTT ATAGAATCAT CTCTGCAGCC GACTAAGTTA
ATGGTCGCAT TAGCCCTAGG CACTAGCTTA GCCTTATCCG GCTGCGCCAC CACGGCACCA
AAACGAGTCG ATACTGGCAG CTTTGCCATG CCAAGTTACG ACAAGTTAGT GCTAGATAAC
GGCCTAACAG TGTATTTAAT GCCACAGCGC GAAGTGCCGT TAATCACCCT AAACGCGGTC
GTGCGTGCCG GGGCGGTAAA CGACACCACA GCGGGTATCG CCCAAATGAC CGCCGAAGGT
TTACTCCTTG GCGCGGCGGG TAAATCCAAG GCCGAGATTG AGCAGCAAGT GGATTTTCTC
GGCGCTAGCT TAGGGGCCGA AGCCGACAAA GAAGGTAGTT ATCTGGCCGC CGATTTTATG
GCGAAAGATA CCGATGTCAT GCTCGGCCTA TTCAGCGCCG CGCTATTAAG CCCCGACTTT
GATTCAGCAG AATTCGACAA GCTTAAGCAG CGCGCCATTG CGGGTTTACA GCAGGATAAA
GAAAGCCCGC GCGCCGTGAT TGGTCGCTAC TTCGATAAAC TGGTGTTCGG TGCCCATCCT
TACGGTAATG CCTCATCGGG TAATCGCGAG TCACTTGAGC AAGTCACAGT GTCGCAGCTG
CGCGCCTTCC ACAAAAGCTA CTATCAACCT GCAAATACCG CATTAACTGT GGTGGGGGAT
TTTGATGTGG CAGCGATGAA GGCCAAGCTA ACCCAGACTT TTGGTCAGTG GAAAGGCAGC
GAAAAACTCG TTCAGCCCGA CTTAAACCAA GGTTTACCTA AGTTAACTGA GGCCAAAGTG
CTGCTGGTGG ATAAGCCAGA TGCGATGGAA ACTACCTTTG TTATCGGTGG TTTAGGCATT
AGCCGTGATA ACCCAGACTA TGTGGGGCTA ACGGTAGTGA ACACCATTTT AGGTGGTCGC
TTTACCTCTT GGCTGAACGA TGAGCTGCGG GTGAATGCGG GGCTAACCTA TGGCGCGCGC
TCCGGTTTTA GTCCTTATAC CGACTCGGGC GTGTTTACCA TTAGCACCTT CACTAAGACG
GAAACCACTC AAGAAGCGAT TGATTTAGCG CTGAAAACCT ATGCTCGTTT ATGGGAAAAA
GGCGTCGACC AAGCGACTCT TGATTCGGCT AAGGCCTATG TTAAAGGTCA GTTCCCGCCT
AAGTTTGAAA CCTCGGGCCA ATTGGCTGGA CTCTTATCTG GCATGTATCT CTACGGCTTC
GATGATAAGT TTATCAATGA GTTCCAAGCC AAAGTGGACG GCTTAACCTT AGAAGAAACC
CAAAGGTTAG TGAAAACTTA CTTCCCACAA AAAGACCTGC AGTTTGTGCT GATTGGCAAC
GCCAGCAAGA TAGCGCCTAT CGCGGCCAAG TATGGCCAAG TGCAAACCGT TGATATTAAT
GCGGTGGGTT TTGGTCAGTA A
|
|---|
| Protein sequence | MKFSFVKSSF IESSLQPTKL MVALALGTSL ALSGCATTAP KRVDTGSFAM PSYDKLVLDN
GLTVYLMPQR EVPLITLNAV VRAGAVNDTT AGIAQMTAEG LLLGAAGKSK AEIEQQVDFL
GASLGAEADK EGSYLAADFM AKDTDVMLGL FSAALLSPDF DSAEFDKLKQ RAIAGLQQDK
ESPRAVIGRY FDKLVFGAHP YGNASSGNRE SLEQVTVSQL RAFHKSYYQP ANTALTVVGD
FDVAAMKAKL TQTFGQWKGS EKLVQPDLNQ GLPKLTEAKV LLVDKPDAME TTFVIGGLGI
SRDNPDYVGL TVVNTILGGR FTSWLNDELR VNAGLTYGAR SGFSPYTDSG VFTISTFTKT
ETTQEAIDLA LKTYARLWEK GVDQATLDSA KAYVKGQFPP KFETSGQLAG LLSGMYLYGF
DDKFINEFQA KVDGLTLEET QRLVKTYFPQ KDLQFVLIGN ASKIAPIAAK YGQVQTVDIN
AVGFGQ
|
|---|
| |