Gene Shewmr4_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3709 
SymbolargC 
ID4254272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4426468 
End bp4427448 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content50% 
IMG OID638120351 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_735829 
Protein GI113972036 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA TCGCCATTAT CGGTGCCAGT GGTTACACAG GCGCACAACT AACAGCTTTA 
GTCCATGCGG AGTCTGAATT ATCGATTCAA GGTCTGTATG TCTCTGAAAA TAGTTTAGAT
AAAGGTAGAG CTTTAGCAGA TTTGTACCCT GTCTACAGCC ACATTGATTT AGCTCTGTCA
CCACTGACTG AAGAAGCGAA GGCGAAGATC GTCGCCGAGG CGGATGCCGT GGTGTTAGCG
ACCGAACATT CGGTGAGTTT GCATTTAGCG GCGTGGTTCT ATAACCAAGG TTTAGCCGTG
TTTGACTTAA GCGGTGCCTA TCGTTTCAGC GATGTGGCGC AGTACCCTAA GTGGTACGGT
TTTGAGCACG AATATCCTGA AGTGTTGGCC AAGGCCGTCT ATGGTCTAGC CGAGTGGAAT
GCCAAAGAAG TCGCCGCGAC TAAAATGATT GCTGTGCCAG GTTGTTACCC AACAGCATCA
TTAACAGCAT TGAAACCATT AAAGAATTTA CTGACGTCAG CCTATCCAGT GATCAATGCG
GTTAGTGGTG TGACGGGCGC GGGTCGTAAG GCGCAGCTGC ATACCAGTTT TTGCGAAGTG
AGCCTCACAC CCTACGGCGT ATTAGGCCAC AGACATCAAC CCGAAATTGC CACTCAACTG
GGGCAAGAGG TGATCTTCAC GCCGCACCTA GGCAACTTCA AGCGCGGCAT TTTAGCGACC
ATCACGGTAC AGCTAAAACC AGGCACTACC ACTGCCGATG TGGCTGCGGC ATACAGTGTG
TATGACCAAG CTCCGCTGGT GACAGTGAAA CAGAACCAGT TCCCGAAAGT GGATGATGTG
GTGCTGACTC CGAATTGCCA CTTAGGTTGG AAGTTTGATG AGAACAGTGG CTACTTAGTG
GTTGCCAGTG CCATCGACAA TTTGATGAAA GGCGCGGCGA GCCAAGCCCT GCAATGCATA
AAGATTCACT TTAACCTTTA A
 
Protein sequence
MKNIAIIGAS GYTGAQLTAL VHAESELSIQ GLYVSENSLD KGRALADLYP VYSHIDLALS 
PLTEEAKAKI VAEADAVVLA TEHSVSLHLA AWFYNQGLAV FDLSGAYRFS DVAQYPKWYG
FEHEYPEVLA KAVYGLAEWN AKEVAATKMI AVPGCYPTAS LTALKPLKNL LTSAYPVINA
VSGVTGAGRK AQLHTSFCEV SLTPYGVLGH RHQPEIATQL GQEVIFTPHL GNFKRGILAT
ITVQLKPGTT TADVAAAYSV YDQAPLVTVK QNQFPKVDDV VLTPNCHLGW KFDENSGYLV
VASAIDNLMK GAASQALQCI KIHFNL