| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3703 |
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| Symbol | |
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| ID | 4254266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4418150 |
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| End bp | 4419229 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638120345 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_735823 |
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| Protein GI | 113972030 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.288222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCAA ATTTATGGAA GCGTCAGGCT CCGCAAATGG TCGGGATTGA TATTGGTTCC
CATGAAGTAA AGGCTATTCT GCTGAGTAAG ACTGCTGATG GATATAAAAT ACTAAGTCAT
GCAGCGGTTC CCGTAAAAAA GGGGGCTATT AACGATCATG ATATTCGTGA TGCCGATGCC
GTTGTTGAAT GTCTCAAACA GGTCAAGCGT ATTTTGCCAA AGTCGGTTAA ATATGCAGCG
GTTGCGGTCT CTGGTTCTGC GGTGATGACT AAGGTCATCT ACATGGATGC CTCGCTGAGC
GAGGAGGAAA TGGAGGCACA AATTGAGATT GAAGCCGATA ACCTTATCCC ATACTCCCTC
GATGAAGTTA GCATTGATTT TGAAACCTTA AATGTTAACA GTACCGATCC TTCTAAGGTT
GATGTGCTAC TGAGTGCGTG CCGCACTGAT AATATTGATG CCAGAGTCGA TGCGCTCGAT
GAAGTCGAAC TCGAAACCAA AGTCGTTGAT GTCGAAGGGT ATGCCTTAGG GCGAGCCGTC
GAGTTGGTGC TAGGTCAGTT ACCCGAAGGC GCTCGGCAGA AGGCGGTGGC CATGGTCGAT
ATTGGTGCCA ATATGACGAC CTTCTCTGTC GTGGAGTCGG GCGAAACAAC CTTTATCCGT
GAGCAAGCCT TTGGCGGTGA GTTATTTACT CAGTCGATTC TGTCTTTTTA TGGCATGTCT
TACGAGCAGG CAGAAAAAGC CAAAATAGAA GGCGATTTGC CGCGTAATTA TATGTTTGAA
GTGTTATCTC CCTTTCAGAC CCAATTGCTG CAACAAATTA AGCGGACGTT GCAAATTTAT
TGTACTTCGA GTGGTAAAGA TAAAGTCGAT TATCTCGTAT TATGCGGTGG AACATCTAAA
CTGGAAGGCA TGGCTAACTT ATTAACGAAT GAGTTAGGTG TTCACACCAT AATTGCCGAT
CCCTTCCAAG GATGCCTGCA CGCGGATGAA TCCGTTAAAA ATATACTGCA ACCTAGCATT
AGCAAATATA TGGTTGCATG TGGCTTAGCG CTGAGGAGCT ACGGTCAATG GCGAACATAA
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| Protein sequence | MLSNLWKRQA PQMVGIDIGS HEVKAILLSK TADGYKILSH AAVPVKKGAI NDHDIRDADA
VVECLKQVKR ILPKSVKYAA VAVSGSAVMT KVIYMDASLS EEEMEAQIEI EADNLIPYSL
DEVSIDFETL NVNSTDPSKV DVLLSACRTD NIDARVDALD EVELETKVVD VEGYALGRAV
ELVLGQLPEG ARQKAVAMVD IGANMTTFSV VESGETTFIR EQAFGGELFT QSILSFYGMS
YEQAEKAKIE GDLPRNYMFE VLSPFQTQLL QQIKRTLQIY CTSSGKDKVD YLVLCGGTSK
LEGMANLLTN ELGVHTIIAD PFQGCLHADE SVKNILQPSI SKYMVACGLA LRSYGQWRT
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