Gene Shewmr4_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3643 
Symbol 
ID4254207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4353885 
End bp4354940 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content52% 
IMG OID638120286 
Productserine/threonine protein kinase 
Protein accessionYP_735764 
Protein GI113971971 
COG category[R] General function prediction only 
COG ID[COG2334] Putative homoserine kinase type II (protein kinase fold) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0800606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGAGA GAGTCGCAAT GAGCCAAGAT AAGTTAGTTC CATCTCAGGG GGCCGTCGAT 
GATACGCATT CGGGCGCAGC CTTTGACTTT CAGGCCTTAA CGCCGGATTT GATTTTAGAT
GCGATCGAGA GTCTCGGAAT ATACCCAGAG ACTGGCCTGC TCGCGCTGAA TAGTTACGAA
AACCGCGTGT ATCAATTTCG CAGCGATGAA GGGCAACGCT ATGTGGTGAA GTTTTATCGC
CCCGATCGTT GGACCGATAC GCAGATCCAA GAAGAACACG ACTATGCCAT CGCGCTTGCC
GAGCAGGAAA TCCCGATGGC GGTGCCCACA TCCGTGCAAG GGCAGACCTT GCATCATTTC
CACGGCTTTC GGTTTGCACT GTTTCCCTCC ATCGGCGGTC GCCCCTTCGA AGTGGATAAC
TTAGAGCAGT TGGAATTTGT TGGGCGTTTT ATCGGTCGTA TACACCAGTA CGGTGCCCAG
TCGACATTTA AGGCCCGTGA GCCGCTAAAT CCGCAGATTT TAGGTGATGA ACCTTTAGCT
TGGTTAAAGC AGTCAGATCT CGTACCAAGC ACACTACGTC CTGCGTTTTT TACTGTGGTG
GAGCAAGTGC TGGCTAAGGT GAATCAGCGT TGGGCGCTGC AAGCTTTTAC GCCCATTCGT
CTGCACGGGG ACTTACATCC GGGGAATATT CTTTGGACAC CCGATGGGCC GGGGTTTGTG
GATTTAGACG ATGCCCGTAT GGGACCGGCT ATTCAAGATT TATGGATGAT GCTGACGGGC
GATAGAGCGC AGCAGCAACT GCAACTCGAG GTATTACTCG AAGCCTATGA AGAGTTTTGT
GAGTTCGATA CTCGGCAGTT GGCGCTGATT GAACCCCTAC GCGCATTACG GATGGTGCAC
TATAACGCTT GGATTGGCAG GCGTTGGCAG GATCCTGCTT TCCCTATGCA TTTTCCTTGG
TTTGGGGATG AAAAGTATTG GGAGCAGCAG ATCTTAGCCT TTAAGGAGCA ACTCGCGGCA
CTCGATGAAC CGCCGCTGAG CCTGATCCCC TATTAA
 
Protein sequence
MYERVAMSQD KLVPSQGAVD DTHSGAAFDF QALTPDLILD AIESLGIYPE TGLLALNSYE 
NRVYQFRSDE GQRYVVKFYR PDRWTDTQIQ EEHDYAIALA EQEIPMAVPT SVQGQTLHHF
HGFRFALFPS IGGRPFEVDN LEQLEFVGRF IGRIHQYGAQ STFKAREPLN PQILGDEPLA
WLKQSDLVPS TLRPAFFTVV EQVLAKVNQR WALQAFTPIR LHGDLHPGNI LWTPDGPGFV
DLDDARMGPA IQDLWMMLTG DRAQQQLQLE VLLEAYEEFC EFDTRQLALI EPLRALRMVH
YNAWIGRRWQ DPAFPMHFPW FGDEKYWEQQ ILAFKEQLAA LDEPPLSLIP Y