| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3597 |
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| Symbol | radC |
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| ID | 4254161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4303346 |
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| End bp | 4304023 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120240 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_735718 |
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| Protein GI | 113971925 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0215962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGATTA AGGATTGGCC CGAGGGCGAA GGCCCGCGGG ATAAATTATT AGTAAAAGGC
GCCGCCCATC TCTCGGATGC AGAATTACTG GCTGTTTTAC TGCGAAATGG TCTGAGCGGT
TTAAATGCGG TCGACCTTGC CCGTTCACTT ATTCAAGAAT TTGGAGGTTT AAGAAGCTTA
CTTTGCGCAC CAAAGCATCA GGTGTGTCGA CTTCCGGGCG TGGGACCTGT AAAATACGCC
CAGCTTCAAG CCGCGGCTGA ATTAGCGAGG CGTGTGGCAC AAGAAAACCT GCAGAGAGGT
CAGGTTTTGA CAAATCCCGA TTTAACTCGG GATTATTTAA TGAGACAATT AGCTGACCGC
TCCTATGAAG TGTTCGCAAT TTTGCTGCTG GATAGCCAGC ATAGAGTGAT TCAATTCGTC
GAATTATTCC GCGGAACAAT AGATTCAGCT TCGGTGTATC CACGTGAAGT GGTGAGCCTA
GTGCTGGAAA AAAAGGCTGC TGCCGTCATA GTGTGTCACA ATCATCCGTC TGGTATTGCC
GAGCCCAGTC AGGCTGACAG ACGAATAACT GAGCGATTAA AAAATGCGTT AGCAACCATA
GACGTATCCT TACTGGACCA TATGGTTGTT GGTGATCGAG AGATAGTTTC CTTCGCGGAA
CGAGGCTGGA TTAATTAA
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| Protein sequence | MAIKDWPEGE GPRDKLLVKG AAHLSDAELL AVLLRNGLSG LNAVDLARSL IQEFGGLRSL
LCAPKHQVCR LPGVGPVKYA QLQAAAELAR RVAQENLQRG QVLTNPDLTR DYLMRQLADR
SYEVFAILLL DSQHRVIQFV ELFRGTIDSA SVYPREVVSL VLEKKAAAVI VCHNHPSGIA
EPSQADRRIT ERLKNALATI DVSLLDHMVV GDREIVSFAE RGWIN
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