| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3596 |
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| Symbol | rpmB |
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| ID | 4254160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4302987 |
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| End bp | 4303223 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638120239 |
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| Product | 50S ribosomal protein L28 |
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| Protein accession | YP_735717 |
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| Protein GI | 113971924 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00843458 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAGAG TATGCCAAGT TACTGGCAAG AAGCCGATGG TTGGTAACAA CCGTTCGCAC
GCAAAAAACG CGACCCGTCG TCGTTTTTTA CCTAACCTGC AAAACCACCG TTTCTGGTTA
GAAGAAGAAA AACGTTTCGT ACAGTTACGT GTATCTACTA AAGGTATCCG TCTGATCGAT
AAGAAAGGTA TTGAAGTTGT TGTTGCTGAA CTTCGTGCCC GTGGCGAGAA GGTGTAA
|
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| Protein sequence | MSRVCQVTGK KPMVGNNRSH AKNATRRRFL PNLQNHRFWL EEEKRFVQLR VSTKGIRLID
KKGIEVVVAE LRARGEKV
|
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| |