Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3569 |
Symbol | murC |
ID | 4254133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4270907 |
End bp | 4272373 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638120212 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_735690 |
Protein GI | 113971897 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000567341 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTAAGA CAGAAAGATA CTTACAGCTA AGAAGTATGA TCCCAGAAAT GCGCCGGATT AAGCGTATTC ATTTCGTCGG CATTGGCGGC GCGGGCATGG GCGGGATCGC TGAAGTATTA GTAAACGAAG GTTATGTCGT CAGTGGTTCT GACATCGCGC AAAATGCCGT GACCGACAGA CTCTGTCTGC TGGGCGCGAA AATTCATATC GGCCATGGCG CCGATAACGT GCAGCAAGCC GATGTGGTTG TGGTCTCGAC CGCGATTAAT CCTGAGAACC CAGAGATTAT TGCAGCTAAG GAATTGCGTA TTCCCATCGT GCGCCGCGCC GAGATGTTGG CCGAGTTGAT GCGTTATCGC CATGGTGTGG CGATTGCGGG AACTCACGGT AAAACCACGA CCACCAGTTT GATTGCCAGT TTGTATGGTC AAGCGGGTCG CGATCCGACC TTTGTGATCG GTGGCTTGCT CAACAGCGCA GGCACTAACG CCCGCTTAGG AACGAGTCGT TATCTGATTG CCGAAGCCGA CGAGAGTGAT GCCAGCTTCC TGCACCTGCA ACCTATGGTG AGCGTGGTGA CGAATATCGA AGCAGACCAC ATGGATACCT ACGGTGGGGA TTTTGAAAAG CTCAAATCGA CCTTCGTGGA CTTTTTACAT AACCTGCCAT TCTATGGCGT AGCTGTGGTG TGTATCGACG ATGCTGTCGT GCGCGAGATT ATGCCGCGTA TTGGTCGCCA CATGATCACC TATGGCTTCA GTGATGATGC CGACGTGCAG GCGCTGAATT TCCAGCAGCA GGGTCACCAA TGCCGCTTTA CCGTCAGACG TAAAGGCAAG GAAGACTTAG ATCTGCTGCT TAACCTGCCT GGTCAGCACA ATGTATTAAA TGCGCTCGCG GCGATTGCCG TGGCGACAGA AGATGAAATC GATGATAGCG CCATCATTCA AGCCTTGGCT GAATTCCAGG GTATTGGCCG TCGTTTCCAA CACTTAGGTA AGTTCGCGAC GCCAAAGGGC GAAGTGATGT TAGTGGACGA CTATGGTCAT CACCCCAGCG AAGTGGCGGC GACCATTAAA GCGGCGCGTG CTGGCTGGCC TGACAAACGC TTAGTGATGG CCTATCAGCC ACACAGATAC ACTCGTACCC GTGACTTGTA CGAAGACTTT ATTGAAGTGT TATCTCAAGT GGATTGCTTG CTGTTACTCG AGGTGTATAG CGCGGGTGAA GCGCCGATCC CCGGTGCCGA TGGCCGCGCA CTGTGCCGCT CGATTCGTTT GCGCGGACAG TTAGATCCCA TCTTTATCGC CAGCCCAGAT CAGTTAGCCG AAGTGCTACC CGATGTGTTG CAGGAGGGGG ATTTATTGTT GACCCAAGGT GCGGGTAATA TAGGCGCCCT GTCGCGCCAG TTAGCCGCCT CTGAATTGGG CTTTAGCACT GCTGCGACAA CCGAGGTAAA ACCTTGA
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Protein sequence | MTKTERYLQL RSMIPEMRRI KRIHFVGIGG AGMGGIAEVL VNEGYVVSGS DIAQNAVTDR LCLLGAKIHI GHGADNVQQA DVVVVSTAIN PENPEIIAAK ELRIPIVRRA EMLAELMRYR HGVAIAGTHG KTTTTSLIAS LYGQAGRDPT FVIGGLLNSA GTNARLGTSR YLIAEADESD ASFLHLQPMV SVVTNIEADH MDTYGGDFEK LKSTFVDFLH NLPFYGVAVV CIDDAVVREI MPRIGRHMIT YGFSDDADVQ ALNFQQQGHQ CRFTVRRKGK EDLDLLLNLP GQHNVLNALA AIAVATEDEI DDSAIIQALA EFQGIGRRFQ HLGKFATPKG EVMLVDDYGH HPSEVAATIK AARAGWPDKR LVMAYQPHRY TRTRDLYEDF IEVLSQVDCL LLLEVYSAGE APIPGADGRA LCRSIRLRGQ LDPIFIASPD QLAEVLPDVL QEGDLLLTQG AGNIGALSRQ LAASELGFST AATTEVKP
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