Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3562 |
Symbol | |
ID | 4254127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4262299 |
End bp | 4265025 |
Gene Length | 2727 bp |
Protein Length | 908 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120206 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_735684 |
Protein GI | 113971891 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000100986 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000109112 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTGGTA AATTACTGAC AAAAGTATTT GGTAGTCGCA ACGACCGTAC CCTCAAAGGG TTACAAAAAG TAGTTAATAA GATTAATGCG CTTGAAGCCG ATTATGAAAA ATTAACCGAT GAACAGCTTA AGGCGAAAAC CGCCGAGTTC CGCGAGCGTT TAGCGGCCGG AGCTTCGTTA GAGAGCATTA TGGCGGAAGC CTTCGCGACC GTGCGTGAAG CATCGAAGCG AGTGTTCGAG ATGCGTCACT TCGACGTGCA GTTACTCGGT GGTATGGTGC TCGACAGTAA CCGCATCGCT GAAATGCGTA CCGGTGAAGG TAAAACCTTA ACCGCAACTC TGCCAGCCTA TTTAAATGCC TTAACTGGCA AAGGCGTTCA CGTTATTACC GTCAACGATT ACTTAGCCCG TCGTGACGCG GAAAATAACC GCCCACTGTT CGAATTCTTA GGCTTAACTG TCGGCATTAA CGTTGCAGGT TTGGGCCAGC AAGCGAAAAA AGACGCCTAC AACGCCGATA TTACCTACGG TACCAACAAC GAATTTGGTT TCGACTATCT GCGCGACAAC ATGGCGTTCT CGCCACAAGA GCGTGTTCAA CGTCCATTGC ACTATGCACT GATCGACGAA GTCGACTCAA TCCTTATCGA TGAAGCCCGT ACGCCATTGA TTATCTCTGG TGCCGCGGAA GATAGCTCTG AGCTATACAT CAAGATCAAC ACGCTTATCC CGAATCTTAT CCGTCAAGAT AAAGAAGACT CTGAAGAGTA CGTGGGTGAG GGTGATTACA GCATCGATGA AAAAGCCAAA CAAGTGCACT TCACCGAGCG TGGCCAAGAG AAGGTTGAGA ACCTATTGAT TGAGCGCGGC ATGTTAGCCG AAGGCGACTC TCTCTACTCT GCGGCGAACA TTTCTCTGCT GCACCATGTG AACGCTGCGC TGCGTGCTCA TACTCTGTTT GAACGCGATG TCGACTATAT CGTTCAAGAT GGCGAAGTGA TCATCGTAGA CGAACACACT GGTCGTACTA TGCCTGGTCG TCGTTGGTCA GAAGGCTTAC ACCAAGCCGT TGAAGCCAAA GAAGGCGTGC GTATCCAAAA CGAAAACCAA ACGCTGGCAT CGATTACCTT CCAAAACTAC TTCCGTTTAT ATGAGAAGTT AGCGGGTATG ACAGGTACAG CCGATACCGA GGCGTTCGAG TTCCAACACA TCTATGGTTT AGATACTGTG GTTGTGCCTA CGAACCGTCC AATGGTTCGT AAGGATATGG CCGATCTGGT TTACCTCACA GCCAATGAAA AATACCAAGC AATTATTAAA GACATTAAAG ACTGCCGTGA ACGTGGCCAG CCAGTATTGG TGGGTACGGT TTCCATCGAA CAGTCTGAAC TGTTAGCGCG TTTGATGGTG AAGGAGAAGA TCCCACACCA AGTGCTTAAC GCTAAGTTCC ACGAAAAAGA AGCCGAAATT GTTGCTCAAG CGGGTCGTAC TGGCGCCGTG ACGATTGCGA CTAACATGGC GGGTCGTGGT ACCGACATCG TGTTAGGTGG CAACTGGAAT ATGGAAATCG AAGCCCTCGA GAATCCAACA GCAGAGCAAA AAGCTAAAAT CAAGGCTGAC TGGCAAGAGC GCCACGATGC CGTGGTCGCC GCTGGTGGTT TACACATCTT AGGTACTGAG CGCCACGAAT CTCGCCGTAT CGATAACCAG CTACGTGGTC GTGCGGGTCG TCAAGGTGAC GCGGGTTCTT CACGTTTCTA CCTTTCTATG GAAGATAGCT TAATGCGCAT CTTCGCCTCG GATCGTGTCT CTGGCATGAT GAAGAAACTG GGCATGGAAG AAGGCGAAGC AATCGAGCAT CCATGGGTTT CCCGTGCGAT TGAAAATGCT CAGCGTAAAG TGGAAGCGCG TAACTTTGAT ATTCGTAAGC AACTGCTCGA ATTTGACGAC GTCGCAAACG ACCAACGTCA AGTGGTTTAC GCACAGCGTA ACGAGTTGAT GGATGCCGAA AGTATCGAAG ACACCATCAA GAACATCCAA GACGATGTGA TCAGTGCGGT GATCGATCAA TACATTCCAC CTCAATCAGT GGAAGAGTTA TGGGATGTGC CAGGATTAGA GCAACGTTTA CAGCAAGAAT TTATGCTAAA ACTGCCAATC CAAGAATGGC TAGATAAAGA AGACGACTTA CACGAAGAAA CATTGCGTGA GCGTATCATC ACTTCTTGGT CTGATGCGTA TAAAGCAAAA GAAGAAATGG TCGGTGCACC AGTACTGCGC CAGTTTGAAA AAGCCGTGAT GCTACAAACC CTCGATGGTC TATGGAAAGA ACACTTAGCG GCAATGGATC ACTTACGCCA AGGTATCCAC TTACGTGGTT ACGCGCAGAA GAATCCAAAG CAAGAATATA AGCGCGAGTC TTTCGAGCTG TTCCAGCAAT TACTGTCGAC CTTAAAGCAT GACGTCATTA GTGTGCTATC TAAGGTACAA GTACAAGCAC AGTCAGACGT AGAAGAGATG GAAGCTCGTC GTCGTGAAGA AGATGCCAAG ATCCAACGCG ACTATCAGCA CGCAGCTGCC GAAGCCTTAG TAGGTGGGGA TGATGGTAGC GACGAGATGA TGGCTCACAC GCCAATGATC CGCGATGGCG ATAAAGTGGG TCGTAACGAT CCTTGTCCTT GTGGCTCAGG CCGTAAGTAT AAGCAGTGTC ACGGCAAGCT AAGCTAA
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Protein sequence | MFGKLLTKVF GSRNDRTLKG LQKVVNKINA LEADYEKLTD EQLKAKTAEF RERLAAGASL ESIMAEAFAT VREASKRVFE MRHFDVQLLG GMVLDSNRIA EMRTGEGKTL TATLPAYLNA LTGKGVHVIT VNDYLARRDA ENNRPLFEFL GLTVGINVAG LGQQAKKDAY NADITYGTNN EFGFDYLRDN MAFSPQERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYIKIN TLIPNLIRQD KEDSEEYVGE GDYSIDEKAK QVHFTERGQE KVENLLIERG MLAEGDSLYS AANISLLHHV NAALRAHTLF ERDVDYIVQD GEVIIVDEHT GRTMPGRRWS EGLHQAVEAK EGVRIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FQHIYGLDTV VVPTNRPMVR KDMADLVYLT ANEKYQAIIK DIKDCRERGQ PVLVGTVSIE QSELLARLMV KEKIPHQVLN AKFHEKEAEI VAQAGRTGAV TIATNMAGRG TDIVLGGNWN MEIEALENPT AEQKAKIKAD WQERHDAVVA AGGLHILGTE RHESRRIDNQ LRGRAGRQGD AGSSRFYLSM EDSLMRIFAS DRVSGMMKKL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEFDD VANDQRQVVY AQRNELMDAE SIEDTIKNIQ DDVISAVIDQ YIPPQSVEEL WDVPGLEQRL QQEFMLKLPI QEWLDKEDDL HEETLRERII TSWSDAYKAK EEMVGAPVLR QFEKAVMLQT LDGLWKEHLA AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQLLSTLKH DVISVLSKVQ VQAQSDVEEM EARRREEDAK IQRDYQHAAA EALVGGDDGS DEMMAHTPMI RDGDKVGRND PCPCGSGRKY KQCHGKLS
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