Gene Shewmr4_3551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3551 
Symbol 
ID4254116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4241232 
End bp4241987 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content49% 
IMG OID638120188 
Productdemethylmenaquinone methyltransferase 
Protein accessionYP_735673 
Protein GI113971880 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG GCGAATCTAA AAATACCCAC TTTGGTTATA AAACCGTAGA GGCGGATAAA 
AAGGCCGATC TCGTTGCCGG CGTGTTTCAT TCGGTTGCCG CCAAGTACGA TATCATGAAT
GACGTCATGT CCTTCGGTAT TCACCGTTTT TGGAAGCGTT ACACCATTGA AGTTTCTGGT
GCGCGCCCTG GTATGAAAGT GCTCGACCTT GCGGGTGGGA CTGGCGATTT AACCGCTAAG
TTCTCCCATC TGGTGGGTGA AAAAGGCGAA GTGGTATTAG CGGATATCAA CGATTCTATG
CTGAAAGTGG GCCGCACTAA ACTGCGTGAC CGCGGCATCG TTGGCAATGT GAGCTATGTG
CAAGCCAACG CCGAAGCGCT GCCTTTCCCC GATAACCACT TCGATATCAT CACTATCGCC
TTTGGTCTGC GTAACGTGAC CGATAAAGAC GCGGCGCTGC GTTCAATGAA CCGCGTGCTT
AAGCCAGGCG GTAAGTTATT AGTGTTAGAG TTTTCTAAGC CGCAACACGA GCTGATGCGT
AAAGTCTATG ACTTATACAG CTTTAAAGTG CTGCCGAAAA TGGGTGAGAT TATTACCAAG
GATGCGGATA GCTATGAGTA TTTAGCCGAG TCGATTCGTA TGCACCCAGA CCAAGAGACC
CTCAAGCAAA TGATGGTCGA TGCGGGCTTT GAACAGGTCG ATTACACCAA TATGACCGAC
GGCATTGTTG CCCTGCACCG CGGTTATAAA TTCTAA
 
Protein sequence
MSEGESKNTH FGYKTVEADK KADLVAGVFH SVAAKYDIMN DVMSFGIHRF WKRYTIEVSG 
ARPGMKVLDL AGGTGDLTAK FSHLVGEKGE VVLADINDSM LKVGRTKLRD RGIVGNVSYV
QANAEALPFP DNHFDIITIA FGLRNVTDKD AALRSMNRVL KPGGKLLVLE FSKPQHELMR
KVYDLYSFKV LPKMGEIITK DADSYEYLAE SIRMHPDQET LKQMMVDAGF EQVDYTNMTD
GIVALHRGYK F