Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3525 |
Symbol | |
ID | 4254090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4212274 |
End bp | 4213743 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638120162 |
Product | KAP P-loop domain-containing protein |
Protein accession | YP_735647 |
Protein GI | 113971854 |
COG category | [R] General function prediction only |
COG ID | [COG4928] Predicted P-loop ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTT CAAATCACGC CAGAAAATAC ATGGAATGGG AACCGAAATA TAACTGGGAG ACCTGTAAGA CGAACAGAAG AGAATTTGGT GAATTTATCG CTCACTTCCT CACTGCAGAT AGCCGAGTTA TTAATCTAGA TGGAATATAT GGCTCAGGTA AAACGGAGTT CATTAGGCGT TTATATATTG AACTAGCCAA AAGAAATCAT CCTGTTGTCT ATATTGATAT TTGGGAAAGT GATTTTTCAA CAAACCCCCT AGCCGTTATT TGTAGTGAAT TAATTCAACA GATTGAGTTC ATATTAAAAG AAAAAAGTCC AAATAGCGAA ATCAAGAATG AAAATAAAGC AACCGAAACA TTTAACCAAC TGAAAGCCAA ATTAGGTACT TGCTTACATT ACGCCACACT TGCCTCACTT GTTAGTGGTG ACAACTCCAT TTCGACGGAA ATATCCTCAG TTAATGCGGC CATATCAGCT ATCCCAAACT TAATAACTGA ATCGAAATCG CAAAAGTACG TTGAAACGAT TCAAAAAAAT CATGTAGCCG CTGTACAAGC CATGAAAGAT ATCAAGGAGT ACATAACCTA TATATCCGAG TTGATAGAGG TTATATACAA ACTAAATACT CCTATTGTTA TTTTGATTGA CGAACTGGAT AGATGTAGGC CTACTTACGC TATTGAAACT CTTGAAGTCA TTAAACATTT CTTTGAAACA AAAGGTTGCA CATTCTTAGT AGCAACAAAC ACTGAGGTTT TAGAGCATTC TGTTCAAGCC GTATACGGTT CAACGTTTGA CGCCAAACAT TATTTACGAA GATTTTTTGA TAGAAAAGTG AGTCTTCCAC CAATATCTAC AGTGGATTAC TTAAAAGCAA AGCAACTCGA TTTTAGTAAA TACACAAACA GTGGAATAAA TCTCCACCCT CTTATCACCA TGGACATAAT CATTGAAGTA TTTGCAGATC TTTTTGAAGC CAATAACATT GAATTAAGGG GAGTTGAGCA AATTCTTAAT AGATTTTTCA CTAGCTTAGA TTATGCCTTA GGAATTAAAG AAAACTCTAA TACTGTTATA AACACAATAG TTCTAATAGT AGGCTTGATA GAACAGCATT TAGACAAACC AGAACTTTCC GAACGTAAAA ATAATAACCC TTTAAGGACG AATATAAAAA CAAATTATAG TCAACTAAGT GGCACTATCG ATGTTATGTT TAATTGCGTA ATGACGACAG AGTCTAAAGT TAAATATAAA GGGCACGGCC ATTATCGGGA GCATGCGTAC GCACAAGAAA TGCTAACTAT TGAATCGTAC AATTTTGGCG ACATTGAAAT ATTAGGTTAC TCTCGAGATA GCATAACCAT ATTTACAGAA ATCATACACC AATACAACAA TCCTAAGTGC AATTATTGGT TATGGGAGAA CTATCAAAGA GTAATAGAGC TATCGGGACA TATTCAATAA
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Protein sequence | MDISNHARKY MEWEPKYNWE TCKTNRREFG EFIAHFLTAD SRVINLDGIY GSGKTEFIRR LYIELAKRNH PVVYIDIWES DFSTNPLAVI CSELIQQIEF ILKEKSPNSE IKNENKATET FNQLKAKLGT CLHYATLASL VSGDNSISTE ISSVNAAISA IPNLITESKS QKYVETIQKN HVAAVQAMKD IKEYITYISE LIEVIYKLNT PIVILIDELD RCRPTYAIET LEVIKHFFET KGCTFLVATN TEVLEHSVQA VYGSTFDAKH YLRRFFDRKV SLPPISTVDY LKAKQLDFSK YTNSGINLHP LITMDIIIEV FADLFEANNI ELRGVEQILN RFFTSLDYAL GIKENSNTVI NTIVLIVGLI EQHLDKPELS ERKNNNPLRT NIKTNYSQLS GTIDVMFNCV MTTESKVKYK GHGHYREHAY AQEMLTIESY NFGDIEILGY SRDSITIFTE IIHQYNNPKC NYWLWENYQR VIELSGHIQ
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