| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3516 |
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| Symbol | |
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| ID | 4254082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4204015 |
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| End bp | 4205838 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120154 |
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| Product | histidine kinase |
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| Protein accession | YP_735639 |
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| Protein GI | 113971846 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.295368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAAGG CGAGCGCAAT GGGGTTGTGG TGTCGGGCAA TACTCGTGAG TGTTATCTTG
AGTCTGACAG GGCTTACCCT GTGCTATGCC GATGAAGATG TGTCCGTCAA TGAATTTAAG
GTGGGTGTGC TGGCCAATCA TGGTGTGTTG CAAGCTAAAC AACGCTGGCA GCCAATGATG
GATTACCTGA GCGAAAAAGT CCCCAATAGC CGTTTTGAAG TGGTGCCGGT GGATTTTAAT
GGCATGCGTA GCCAGTTACT TAGCCACGAC TTGCAATTTA TTGTGACCAA CCCCGGCCAG
TATCTGCATT TGAGTAATAA CTTTCCGCTC TCGTGGCTGG CGACCATGAA GAGCCGTAAA
CATCAAGGCA GCACTTTTAC CATAGGCGCG ACCATTATTG TGCGTGCCGA TAGCCCAATC
CGCAGTTTGC AGGATTTACG GGGCAAGAAT GTGGTTGCCA GCGATCCGCA GGCGCTCGGT
GGCTATCAAG CGGCGATGGG ACTGCTGCAT AAAATGGGCT ATTTGCCGGA GCAGTTTTTC
GGTGATGTGC GATTCTTAGG CTTTCCCCTC GAGCCGCTAA TCTATCAAGT GCGCGATGGT
AATGCCGATG CTGCGATTGC GCCTTTTTGC ACCTTAGAGG AAATGATTGA AACCGGGCTT
ATCAATCAAG CCGATTATCG GGTTATTCAT CCAACCAATC CTCCTGGTTA TGACTGCGAG
GTGAGCACCC AGCTTTATCC TAATTGGTCA TTCGCGGCCG CAGATACAGT ATCGCCGCGT
ATTACCATGC AAATTACTCG CGCCCTGTTT GACTTGCCCG CCGACCATGT GGCGGCGATT
ACCGCCGATA CCTTAGGTTG GACAGCGCCG GTGAGTCAGC TCAAGGTGAT TGAATTATTT
AAAGAATTAC AGCTGCAAGG CGCAGCCCCT CCTCTCTATC AAACCGTCTA TAAATGGATG
GAGAAAAATA AAGAGTGGGG TGGGGTATTG CTGCTGATCT TTATCGTATC GACCATTTAT
CACCTGTGGC TCGAATATAA ATTTCGCCAA AAGAGCGAGT TTTTGGTCAG CACCGAGCGG
CAGTTAAAGG ATAAAGCCTT GCAGCTAGAG CGGTTGCAGA GTGCGGCGAT TCTCGGGGAG
ATTGGCGCGG GGCTTGCCCA TGAATTAAAT CAACCTATTG CCGCCATAAC CCAATACAGT
GAAGGCGCCA TGCTACAGCT AGAAAGGCTG GGGCAGGATA ATCCTGAACT CTATGATATT
TTAGGGAAAA TCAACGCGCA ATCGATACGA GCAGGGGCGG TTGTGCACCG CATTCGCGGT
TTACTCAAAC GTCGCCAGTC TAAGGCCGAA CCGCTCAATG TGACCCTAGT CGTCAAAGAA
GCCTTAGCCC TGCTGCGGCG CGAGTTAGAC CGCGCAGGTG TGCAAGTTAC TGTATTGGTC
GAAGGTCATC CCTTTGAAGT CTTGGGGGAT AGCGTGGGCC TCAGTCAAAT GTGGGTCAAC
CTAGTCAAAA ATAGTTTAGA TGCGCTAGAA GCCTGTGAAG ATCACCGAAC GCGCCAGTTG
AGGGTGGAGA TCTATTATCA ACCCACTGAA ATTAAAGTAT TAGTGATTGA TAATGGTGAA
GGATTGCAAC GCCAAGCCAG TGAGCTAATG GCCTCATTTG CCTCCACCAA GGATGCGGGA
CTCGGTTTAG GTTTAGCCAT TTGTAAGGAT GTCGTCAGCC GCCACCATGG CAGTATTGAG
ATTGAAAACT GCAAGCAATC GGTACATGCC CAATTACCCT GGCAGCAAGG CTGTGTGGTA
ACCGTGGTAT TGCCCAGCCA ATAA
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| Protein sequence | MEKASAMGLW CRAILVSVIL SLTGLTLCYA DEDVSVNEFK VGVLANHGVL QAKQRWQPMM
DYLSEKVPNS RFEVVPVDFN GMRSQLLSHD LQFIVTNPGQ YLHLSNNFPL SWLATMKSRK
HQGSTFTIGA TIIVRADSPI RSLQDLRGKN VVASDPQALG GYQAAMGLLH KMGYLPEQFF
GDVRFLGFPL EPLIYQVRDG NADAAIAPFC TLEEMIETGL INQADYRVIH PTNPPGYDCE
VSTQLYPNWS FAAADTVSPR ITMQITRALF DLPADHVAAI TADTLGWTAP VSQLKVIELF
KELQLQGAAP PLYQTVYKWM EKNKEWGGVL LLIFIVSTIY HLWLEYKFRQ KSEFLVSTER
QLKDKALQLE RLQSAAILGE IGAGLAHELN QPIAAITQYS EGAMLQLERL GQDNPELYDI
LGKINAQSIR AGAVVHRIRG LLKRRQSKAE PLNVTLVVKE ALALLRRELD RAGVQVTVLV
EGHPFEVLGD SVGLSQMWVN LVKNSLDALE ACEDHRTRQL RVEIYYQPTE IKVLVIDNGE
GLQRQASELM ASFASTKDAG LGLGLAICKD VVSRHHGSIE IENCKQSVHA QLPWQQGCVV
TVVLPSQ
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