| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3505 |
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| Symbol | |
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| ID | 4254071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4190995 |
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| End bp | 4191753 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120143 |
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| Product | uridine phosphorylase |
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| Protein accession | YP_735628 |
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| Protein GI | 113971835 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2820] Uridine phosphorylase |
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| TIGRFAM ID | [TIGR01718] uridine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000185074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATG TATTTCACTT AGGTTTGACC AAAGCGATGC TCGATGGTGC CACTTTGGCG
ATTGTGCCCG GCGATCCTGA GCGTGTAAAA CGTATTGCCG AGTTAATGGA TAATGCCACA
TTCCTTGCAA GCCACCGCGA GTACACCAGC TACTTAGCGT ATGCTGACGG TAAGCCAGTG
GTGATTTGCT CTACCGGTAT CGGTGGTCCA TCAACGTCGA TTGCAGTTGA AGAGTTAGCG
CAATTAGGTG TGAATACCTT CCTGCGTGTT GGTACCACAG GTGCGATTCA ACCCCATGTA
AATGTGGGTG ATGTGATTGT GACTCAAGCG TCAGTGCGTT TAGATGGCGC GAGCTTACAT
TTTGCACCTA TGGAGTTCCC AGCGGTTGCT AACTTCGAAT GTACCACTGC TATGGTTGCT
GCGTGCCGCG ATGCGGGCGT AGAGCCTCAT ATCGGCGTTA CCGCATCTTC TGATACCTTC
TACCCAGGCC AAGAGCGCTA TGACACTGTG ACTGGCCGTG TGACCCGTCG TTTCGCTGGC
TCAATGAAAG AGTGGCAGGA TATGGGCGTG CTGAACTATG AAATGGAATC TGCGACCCTA
TTCACTATGT GTGCGACTCA AGGTTGGCGT GCGGCGTGTG TGGCTGGCGT TATCGTAAAC
CGCACTCAAC AGGAAATCCC GAACGAAGCG ACAATGAAGC AAACTGAAGT CAGTGCTGTT
TCTATCGTCG TGGCTGCCGC TAAGAAGCTA CTGGCTTAA
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| Protein sequence | MADVFHLGLT KAMLDGATLA IVPGDPERVK RIAELMDNAT FLASHREYTS YLAYADGKPV
VICSTGIGGP STSIAVEELA QLGVNTFLRV GTTGAIQPHV NVGDVIVTQA SVRLDGASLH
FAPMEFPAVA NFECTTAMVA ACRDAGVEPH IGVTASSDTF YPGQERYDTV TGRVTRRFAG
SMKEWQDMGV LNYEMESATL FTMCATQGWR AACVAGVIVN RTQQEIPNEA TMKQTEVSAV
SIVVAAAKKL LA
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