Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3494 |
Symbol | |
ID | 4254060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4178500 |
End bp | 4179660 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120132 |
Product | hypothetical protein |
Protein accession | YP_735617 |
Protein GI | 113971824 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03505] FimV N-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAAAA TAGCGAAATC ATTAGGACTA TTCGCCTTAG TGTGTAGCGC TTGTGTGCAG GCGCAAGTTT CCCATGTGAG TATCAATAGC CGCATGTTTG ATTTGGGCGC TTACCCCAAA ATGCGTGTCA ATGTGATCAC TGATAATCAG GATATGACTC GGCTCGAATT TGTGGTGCAG CAGTCCGGTG GTGAAGAAAA ACTCATGGCC GAGCAGCTTA ACCGTTTCTT GGTTTTGCTA ACGGGCGTGG AAGATGTAAC GGATCCTAAA GCTCGGCTGT TAGTACGCGA ATACCGTGTC GATCGTTGGT ATGAAGTGAA AAACCTGCCG CTGTTTGATA ACGCTTCCTC TGCGGCGTCT TCAGTATCGC AAGCAAAAAC GGCGGTTGTG AAATCGAGTA AAGCGGCCAC AGCCGAGACA AGTCAGCTGG TGGCAAGCTC TGCTAAAAGT GACAAAACCC CAGTTAAATC AACTAAGGTT GTGCAAGAGG TGAATTTAGT CACCGCTGAA GCAGATGTTG TGCCCGTTGC TTCCGTTGTT GTGGCTGCGG TGACAACAGA AGTTGCCGCT ACGCCTCGCG CCTCTGGATT TACCTTCCCT GAGGATAAGT CTGATGTGAA AGCATCCTCC ACCTCGAGTT CGTCGGTAGT GGCATCTGCT GAGGCTAAAG CAGAAATGGC TAAATCTGAG CCATCTAAAA CTGAAGCAGC TAAAGTTGAG ATGTCTACAC CTGAACCGTC GACAACAGAA GTCGCGAGTG GACCTGCGGT TGCACAAGCG TCTGCTGATC TGCCAAGAGT GGATAAGAGC AAAACTGCGA TTGATGCGCC CGAAGTTAAG GCTGGCGAAG AAACTGCAAC TGAGGTTAAG ACGGTAAGTT CGACAAATGC TCAGTCAACA AATTCGGGTG AGTGTATGTT GGATTATCAC AACGAGACCC TATGGCGCAT TGCCAATCGC TATGCCCCTG AATGGAAAGT AAGTGTCTAT GGTGCCATGC TGGCGATCCA CGATGCTAAC CCTAAGGCAT TTTCGAAGAA TCGAATTAAC GCGCTGAAGA AAGATGCCAC GCTTTATTGT CCATCGGCTG AGATACTTGC CCGTTATCCC GAAGCGCAGG CGGCTAAGAC AAGTTTCGAG GATAGAGAGG CGGGGAGATA A
|
Protein sequence | MTKIAKSLGL FALVCSACVQ AQVSHVSINS RMFDLGAYPK MRVNVITDNQ DMTRLEFVVQ QSGGEEKLMA EQLNRFLVLL TGVEDVTDPK ARLLVREYRV DRWYEVKNLP LFDNASSAAS SVSQAKTAVV KSSKAATAET SQLVASSAKS DKTPVKSTKV VQEVNLVTAE ADVVPVASVV VAAVTTEVAA TPRASGFTFP EDKSDVKASS TSSSSVVASA EAKAEMAKSE PSKTEAAKVE MSTPEPSTTE VASGPAVAQA SADLPRVDKS KTAIDAPEVK AGEETATEVK TVSSTNAQST NSGECMLDYH NETLWRIANR YAPEWKVSVY GAMLAIHDAN PKAFSKNRIN ALKKDATLYC PSAEILARYP EAQAAKTSFE DREAGR
|
| |