| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3482 |
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| Symbol | |
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| ID | 4254048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4164634 |
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| End bp | 4165854 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120120 |
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| Product | type II secretion system protein |
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| Protein accession | YP_735605 |
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| Protein GI | 113971812 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0250781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTTT ATCAATACCG TGGACGCAGT GGACAAGGTC AAGCCGTAAC GGGTCAGCTC
GATGCTGCCT CCGAGGGAGC GGCGGCCGAT ATGTTGTTAG CCCGTGGCAT TATCCCGTTA
GAAGTCAAAG TCGCTAAAGA AACTAAGTCC TTTACCTTGG CGCAGTTGTT TAAGCGCAAA
GTCGGCTTGG ATGAACTGCA AATCTTTACC CGGCAAATGT ACTCGTTAAC GCGCTCGGGG
ATCCCTATCC TACGCGCCAT TGCAGGTTTA TCCGAAACCG CCCACTCCCA ACGAATGAAA
GATGCGCTGA ATGATATTTC AGAGCAGTTA ACTGCGGGGC GCCCACTGTC ATCGGCCATG
AACCAACATC CAGATGTGTT TGATTCTCTG TTTGTTTCTA TGGTGCACGT GGGGGAAAAC
ACGGGTAAGT TAGAGGACGC TTTTATTCAG CTCTCGGGTT ATATCGAGCG TGAGCAGGAA
ACTCGCCGCC GAATCAAAGC CGCGATGCGG TACCCCATAT TTGTATTGAT TGCCATCGCG
CTGGCGATGG TGATTTTAAA TATCATGGTG ATCCCGAAAT TCGCCGAGAT GTTTGCCCGC
TTTGGTGCCG ACTTGCCTTG GGCGACTAAG GTGTTAATCG GCACATCAAA CCTGTTTGTA
AACTATTGGC CCCTGATGCT GATAATACTG CTCGGAACCG TTATTGGGAT CCGCTACTGG
CACCATACGG AAAAAGGTGA AAAACAATGG GACCAGTGGA AGTTACACAT TCCCGCCGTG
GGTTCGATTA TTGAGCGCTC GACTCTCTCC CGTTATTGCC GCAGTTTTTC GATGATGTTG
AGCGCGGGTG TGCCGATGAC GCAGGCGCTC AGTCTAGTGG CCGATGCGGT GGATAATGCG
TATATGCACG ACAAAATTGT CGGAATGCGC CGTGGTATTG AGTCTGGCGA ATCTATGCTC
AGGGTGTCGA ATCAGAGTAA ATTGTTTACG CCACTGGTGT TGCAAATGGT TGCGGTAGGC
GAAGAAACTG GACAGATTGA CCAACTATTA AATGATGCCG CCGATTTCTA CGAGGGTGAG
GTCGACTATG ATCTTAAAAA TCTCACCGCT AAGTTAGAAC CGATTTTGAT TGGGATTGTG
GCAGTTATCG TGTTGGTGCT GGCGCTGGGT ATTTATCTGC CGATGTGGGA TATGCTCAAC
GTAGTCAAAG GCGGGAAATA A
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| Protein sequence | MPVYQYRGRS GQGQAVTGQL DAASEGAAAD MLLARGIIPL EVKVAKETKS FTLAQLFKRK
VGLDELQIFT RQMYSLTRSG IPILRAIAGL SETAHSQRMK DALNDISEQL TAGRPLSSAM
NQHPDVFDSL FVSMVHVGEN TGKLEDAFIQ LSGYIEREQE TRRRIKAAMR YPIFVLIAIA
LAMVILNIMV IPKFAEMFAR FGADLPWATK VLIGTSNLFV NYWPLMLIIL LGTVIGIRYW
HHTEKGEKQW DQWKLHIPAV GSIIERSTLS RYCRSFSMML SAGVPMTQAL SLVADAVDNA
YMHDKIVGMR RGIESGESML RVSNQSKLFT PLVLQMVAVG EETGQIDQLL NDAADFYEGE
VDYDLKNLTA KLEPILIGIV AVIVLVLALG IYLPMWDMLN VVKGGK
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