| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3480 |
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| Symbol | |
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| ID | 4254046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4163407 |
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| End bp | 4164024 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120118 |
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| Product | methylation site containing protein |
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| Protein accession | YP_735603 |
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| Protein GI | 113971810 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000493749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACTA AGCAAGATGG TTTTTCATTG ATTGAACTGG TCATAGTGAT CGTTATTTTG
GGTCTGTTGG CCGCAACCGC GATCCCTCGT TTTTTAAATG TCACCGATGA TGCTGAAGAT
GCCAGTGTGG ACGGAGTCGC GGGTGGTTTA TCCACCGCAG TGGGTTTTGT GCGTTCACAA
TGGGAAGTCG ATGGTCGCCA AAATAGCAGT GTGATCTTAG ACGGTACCTC AGTGTCCCTC
GACCCACGTT TTGGTTATCC AACGGGCACC TCTGGTACCG ATGCGACGGC GATGACCGAT
GCAAGCTGCC AGCAGGTATT TAATACTGTG TTGCAAAGTG CACCGCGTAA CGTGCTTTAT
TCGCAGGATG CGCGCAATCA ACGTTATACA GTGCGCGTTA TCGATGGTGC GGGCGGAAGC
TCAAATGCGA TTAATGGCAC ATCCGTAAGC GGTTTAGACC TATGTGTGTA TCACCAAGTG
GCTTCACTGG TGCTAAACCA AACCACTGGT GTACCGACGC CAGCGCCAGA TTTATCGACT
GCGGGTGCAA AAGGGGTGGT TTATAACCCA GGTACGGGCA AAGTATTAAG TTTCACTCAA
ACACCATTTA CGCTTTAA
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| Protein sequence | MKTKQDGFSL IELVIVIVIL GLLAATAIPR FLNVTDDAED ASVDGVAGGL STAVGFVRSQ
WEVDGRQNSS VILDGTSVSL DPRFGYPTGT SGTDATAMTD ASCQQVFNTV LQSAPRNVLY
SQDARNQRYT VRVIDGAGGS SNAINGTSVS GLDLCVYHQV ASLVLNQTTG VPTPAPDLST
AGAKGVVYNP GTGKVLSFTQ TPFTL
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