Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3456 |
Symbol | |
ID | 4254022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4132998 |
End bp | 4133531 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120094 |
Product | hypothetical protein |
Protein accession | YP_735579 |
Protein GI | 113971786 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATTG TTGGTGATTC AGAGCATTTT AAACAACCCT ATGACAGTGA CGAAGAGTAT GTCAGCAAAA CCGAGGACAA GCGTGACTGC GAAGCTGCTC AAAAAGTCGG TATGGAATTG GTGTCGCTCA GCAAAACCCA GCTAGATAAA ATCGAGCTGG ACGAGCACTT ATATGACAGC ATCCAGCAAG CCCATAAGAT TAAGCCGAAG ACAGAAGCCT ATCGTCGCCA TATGCAATAT ATCGGTAAGT TGATGCGTCA CGTCGATGTG GAGCCGATTA AAGCGGCGCT CGCTGTCGTG CTGAACAAAA ACAGCAACGA AACCGCTAAG CTGCAAATAT TCGAGAAAAT GCGCGAGCGC TTACTGAGCC AAGGCGACAG CGAAATTCAA ACCTTAGTGG AACATTACCC ACAGTTGGAC AGACAGAAGC TGCGTACTTT AGTGCGTCAA GCCACGAAAG AGCTGGCGAA AGGCCCTGAG TCCAAATCCT CAAAAGAGCT GTTTAAATAC CTACGCAGCG AAATTCAAGA CTAA
|
Protein sequence | MKIVGDSEHF KQPYDSDEEY VSKTEDKRDC EAAQKVGMEL VSLSKTQLDK IELDEHLYDS IQQAHKIKPK TEAYRRHMQY IGKLMRHVDV EPIKAALAVV LNKNSNETAK LQIFEKMRER LLSQGDSEIQ TLVEHYPQLD RQKLRTLVRQ ATKELAKGPE SKSSKELFKY LRSEIQD
|
| |