| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3451 |
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| Symbol | rimO |
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| ID | 4254017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4125965 |
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| End bp | 4127395 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120089 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_735574 |
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| Protein GI | 113971781 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTG AAACTTTTAA TCCTAAGCAA ACAACCACGC TTGAGACCCC AGCCAAGACA
TTAGAAGCAG CGAGCGCTGA TTCTACTGCA ACAGGGAATC GCATCGGTTT CGTGTCTTTG
GGTTGCCCAA AAAACCTAGT GGACTCAGAG CGCATTCTGA CCCAATTACG CATCGACGGC
TATGAAGTCA CCAACAGCTA CGACAATGCC GATCTGGTTA TCGTCAACAC CTGTGGCTTT
ATCGATGCGG CGGTTGAAGA ATCCTTAGAT GCGGTGCGCG AAGCCCTAGA AGAAAACGGC
AAAGTGATCG TGACCGGCTG TTTAGGCGCC AAGGAAAACC AAATCCGTGA AGTGCACCCA
GACGTGCTCG AAATCACGGG GCCACACAGC TACGAAGCCG TGTTAAAGCA TGTACACAAG
TACGTGCCAA AACCAGAGCA CAACCCATTT ACCTCGTTAA TCCCACAAAC TGGGGTTAAG
TTAACGCCTA AGCATTATGC TTATTTAAAG ATTTCAGAAG GTTGTGATAA CCGTTGTACC
TTCTGCATCA TCCCTGCACT GCGTGGCGAT TTAGACAGCC GCCCAGCGGG TAGCGTTTTA
GATGAAGCGA AACGCTTAGT TGAATCAGGC GTACAAGAAA TTTTAGTCGT TAGCCAAGAC
ACCTCTGCCT ACGGTAAAGA CAAGGGCGGC CGCACCGATT TCTGGAACGG TATGCCAGTG
AAGCAAGACA TCACTAGCCT TGCCCGCCAA TTAGGCAAGA TGGGCGCTTG GGTACGTTTA
CACTACATCT ACCCATACCC ATGGGTAGAC GATCTAATCC CCTTGATGGC CGAAGGTTTA
ATCCTGCCAT ACCTAGATAT TCCAATGCAG CACGCCAGCC CACGCATCCT GAAGATGATG
AAGCGTCCGG GCCGTGTTGA TCGTCAGTTA GAAGCCATTC AACGCTGGCG CGAAATCTGC
CCAGACTTGG TGATCCGCTC AACCTTTATC GTGGGCTTCC CTGGCGAAAC TGAAGAAGAC
TTCGAAATGC TGCTCGACTT CCTGCGTGAA GCGCGCCTCG ACCGCGTAGG TTGCTTCAAG
TACTCAGAAG TAGAAGGTGC TGTAGCCAAC ACCATCGCTG AACTTATCAG CGAAGACGTG
AAGGAAGACA GATACCACAG ATTTATGGAA GTCCAAGCCG AGATCAGCGC CGAGCGTTTA
GCCCGTTTCG TTGGCCGCAC TATGGATATT CTGATCGATG ACGTAGACGA AGAAGGCGCC
ATTGGCCGCA GCTTCGCCGA TGCTCCAGAA ATCGACGGCA TGGTCTTTAT CAACGGTGAA
ACCGAACTCG AACCCGGCAT GTTAGTTCGT GCTGTGATCA CTCACTCGGA CGAGCACGAT
CTGTGGGCCG AGTTAGTCGA CGCCGATGCA GAAGATGATA TCGAGGCTTA A
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| Protein sequence | MTVETFNPKQ TTTLETPAKT LEAASADSTA TGNRIGFVSL GCPKNLVDSE RILTQLRIDG
YEVTNSYDNA DLVIVNTCGF IDAAVEESLD AVREALEENG KVIVTGCLGA KENQIREVHP
DVLEITGPHS YEAVLKHVHK YVPKPEHNPF TSLIPQTGVK LTPKHYAYLK ISEGCDNRCT
FCIIPALRGD LDSRPAGSVL DEAKRLVESG VQEILVVSQD TSAYGKDKGG RTDFWNGMPV
KQDITSLARQ LGKMGAWVRL HYIYPYPWVD DLIPLMAEGL ILPYLDIPMQ HASPRILKMM
KRPGRVDRQL EAIQRWREIC PDLVIRSTFI VGFPGETEED FEMLLDFLRE ARLDRVGCFK
YSEVEGAVAN TIAELISEDV KEDRYHRFME VQAEISAERL ARFVGRTMDI LIDDVDEEGA
IGRSFADAPE IDGMVFINGE TELEPGMLVR AVITHSDEHD LWAELVDADA EDDIEA
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