Gene Shewmr4_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3443 
Symbol 
ID4254009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4115479 
End bp4116045 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content54% 
IMG OID638120081 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_735566 
Protein GI113971773 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA GATATGTGAT GGTGCACGAT GAGAACAAGT GCATCGGCTG CCAAGCTTGT 
AACGTGGCCT GCCGCAGTGA AAACGGTGTC CCCGAGGGCG TGACTCGCTT ACAAGTGCGC
GTAGAGGGCC CCTTCGGCGA GATGCCACAC CTGCACTTTA AGTACCACAG GGTATCGTGC
CAGCAGTGTG AAGATGCGCC TTGTGTGAAG GTGTGTCCAA CGGGGGCGGC CTATGTGGGT
GAGGATGGGA TTGTCTCCAT CCATGGCGAT AAGTGTGTGG GCTGTATGTA CTGCGTGGCG
GCGTGCCCCT ACAAGGTGCG TTTTATGAAT CCAGAAACCA AAGTGGCTGA TAAGTGTAAC
TTCTGTAAGG ACACGCGCTT AGCCCGAGGT GAAGAGCCCG CCTGTGTGAC TGTGTGTCCG
ACCGATGCCT TAGTCTTTGG CGATGCCAAC GATCCACAGA GTGAGGTCGC TATGCTACTC
AACACTAAGA TCACTTACCA AGATAAGACC CATTTAGGCA CTCAGCCTAG GGTATATCGC
GTTCCTACCA AAAGAGGGGG GATTTGA
 
Protein sequence
MTKRYVMVHD ENKCIGCQAC NVACRSENGV PEGVTRLQVR VEGPFGEMPH LHFKYHRVSC 
QQCEDAPCVK VCPTGAAYVG EDGIVSIHGD KCVGCMYCVA ACPYKVRFMN PETKVADKCN
FCKDTRLARG EEPACVTVCP TDALVFGDAN DPQSEVAMLL NTKITYQDKT HLGTQPRVYR
VPTKRGGI