Gene Shewmr4_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3435 
Symbol 
ID4254001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4107424 
End bp4107900 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content51% 
IMG OID638120073 
ProductMarR family transcriptional regulator 
Protein accessionYP_735558 
Protein GI113971765 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGA AAGAATTAGA GCGATTAAAG GAGTTATCCC TGGCGGAACA TTTGGGCCGC 
TTGCACCGAC TATGGCGCAC CGTGGCGGAT GTGGAATTAG CGCCACTCGG GTTAACCCAT
CCTCGTTGGA CGGCATTGTG GAAGTTATTG CGTCTGGGCG ACAACGTGAG CCAAAAGGTG
TTGGCGGATG CGCTGGAAAT TGAATTGGCT TCTTTGATGC GCACGTTAGG GCAGTTAGAG
GAACAAGGTT TAGTCGAGCG TCACTGCTGC ACTAAAGATA AGCGCGCCCG AATCGTGTCG
TTAACACCCG CGGGAAAGGA TGTATTAAAG CAAGTCGAAG CGCGGATTAT TCAAGTGCGC
GCAGAGTTGT TGGCTGGGAT CAGCGCCAGT GAGCTTAGCG AATTTGAACG CATCATTAGC
CTAATCAGTG ATAACGCCTT AGCCAAATTG GCTAAGAGCA CAGAAATTCT TGAGTGA
 
Protein sequence
MMQKELERLK ELSLAEHLGR LHRLWRTVAD VELAPLGLTH PRWTALWKLL RLGDNVSQKV 
LADALEIELA SLMRTLGQLE EQGLVERHCC TKDKRARIVS LTPAGKDVLK QVEARIIQVR
AELLAGISAS ELSEFERIIS LISDNALAKL AKSTEILE