Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3432 |
Symbol | |
ID | 4253998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4104495 |
End bp | 4105121 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638120070 |
Product | cytochrome c family protein |
Protein accession | YP_735555 |
Protein GI | 113971762 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.402335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTA AAATTAGAAC ATTAACTAAA GGCATCGCAC TCATCTACGG CTGTGCCTTG ACCTCTGTAG CCATAGCCAA TCCAACTACA GTCCCGCCAG CGGGACAAAT CTGCGTGACC TGTCACGGCG CCGAAGGCGA GGGCATAGAA CCCCTCGGCC CCCGTCTCGC TGGACTCTCG AAAGAATATA TCACCACCCA GTTACAACAT TTTCAGGCGG GTGTGCGCCA AAACGCGACC ATGATGCCGA TGGCGATGAC ATTGCAAGGT GATGGCATCG AGCAAGTGGC GAGTTACTTC TCCGACAAAT CACCTAAGAC TGAGGTCAAG CCGGTGATCC GTGGTGAGCA GGTGACCTTT AGCGACGATA CCGCGCGCTT AGCCTATCAA GGTGATTGGT CTCGCGGCTT ACCGGCCTGT GTGACTTGCC ATGGCCCCTC GGGTTTAGGT GGCGGCTTGT TACCACGTTT AGCGGGTCAG CAGGCCAGTT ATATCAAGAC GCAACTCTTG GCGTGGCAAG CTGGCACTCG TAAGGGAGAT GTGGACGGCA TGATGGCCAA TGTGGCTAAC AAGCTGACCG CCGCCGAGGT GGATGCCTTA GCGAACTACT TTGCGAATTT GAAATAA
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Protein sequence | MNIKIRTLTK GIALIYGCAL TSVAIANPTT VPPAGQICVT CHGAEGEGIE PLGPRLAGLS KEYITTQLQH FQAGVRQNAT MMPMAMTLQG DGIEQVASYF SDKSPKTEVK PVIRGEQVTF SDDTARLAYQ GDWSRGLPAC VTCHGPSGLG GGLLPRLAGQ QASYIKTQLL AWQAGTRKGD VDGMMANVAN KLTAAEVDAL ANYFANLK
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