| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3406 |
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| Symbol | dipZ |
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| ID | 4253972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4066050 |
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| End bp | 4067891 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120044 |
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| Product | thiol:disulfide interchange protein precursor |
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| Protein accession | YP_735529 |
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| Protein GI | 113971736 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0237355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TACTTAGCCT TATTTTCACC GCGTTACTGT TCCTTACGTC TCTCACCCTA
AGTGGCAACG CCTTCGCCAA TAGCTTTGGT TTTCTAAAAA GCGAACCCGA GTTAATGCCC
GTCGATCAAG CCTTTGCCTT CGATTTTAAG CAAGAAGGTA ATAAGGTCAC CCTCAATTGG
GTGATTGCCG ATGGCTATTA TATGTATCGG GATAAGCTCA AATTTAGCGT CAATGGCGCC
GAACTTGGCA CCATCGACCT GCCAAAGGGT AAGCCCCACA ACGACGAATA TTTCGGTGAG
CAAGAGGTTT ACTACACCTA TATCGATATT CCCGTTGGCC TGAAACAAGC CGATGATAAC
GGCACCTTAA GCGTGACCTT TATGGGCTGC GCCGAGGGTA AACTCTGTTA TCCACCGACC
AAACGTGATG TGACCCTAAA AGCTGTCGCG GCCAATGATG GGAACATTGC AACGGGTGCA
GACAGCAACG AAACGACTGA ACCTACCGCC ACTGCTGATG CTAAGCAAAC AGGTAGCGCC
CCAAGCCAAC CTATTACTCA GCAGGACAGC CTAAGCCAGA TGCTGTCTAA CGACAGTTTA
CTCTGGACCT TAGTGATCTT CTTCGGCCTA GGGATTGGTC TGGCGCTCAC GCCTTGCGTC
TTCCCTATGT ATCCGATCCT ATCGGGCATT ATTGTCGGCC AAGGGCAAAA ACTATCAACC
GCCAAAGCCT TCACCCTGTC GATGGCCTAT GTGCAAGGTA TGGCGATCAC CTACTCGATT
TTAGGTCTAG TGGTTGCCTC TGCAGGGATG AAATACCAAG CGGCGCTACA GCATCCCGCT
GTGCTGATCT TTTTAGCAAT CCTGTTCTTT GTGCTCAGTT TATCCATGTT TGGTTTGTAC
GATCTCAAAC TGCCTTCTAG CTGGCAGGAG AAGATGAACT CGATTTCAAA CAATCAAAAG
GGCGGCAATT TAGTTGGCGT GTTTTTGATG GGGGTGATCT CAGGATTAGT GGCCTCACCT
TGTACTACGG CCCCGCTCTC AGGCGCCTTA GTCTATGTGG CGCAAACTGG CGATTTATTG
CAAGGTTTCC TCGCGCTCTA CGTGCTGAGT ATGGGTATGG GTGTACCGCT ACTCATCATT
GGTACCTCGG GTGGTAAGTT ACTGCCACGC GCTGGCGCTT GGATGAATAT CATTAAAACC
GTGTTCGGTT TCCTCCTGAT TGCGGTATCG ATTGTGATGC TTGGCCGTAT TTGGACGGGC
GTGGTTTCCG ATCTGCTCTG GTCGCTGTGG GGCATTAGCT TTACCGGTTA CCTGATGCAC
CAAAACAAAC TCAGCGCCTT TAACTGGAAA CAAACCGTGC GCTCAGTGCT GCTGACACTC
ACGCTGTTGG CCAGCTTCTC CTACGGTTTC CAAGCGGTCA TGGGCCACTT TGGCTTTACC
CATGCGCCAA TGGGCGGCGT GGCGACAACT GAGGAGGAAC ACGGCTTTAA ACGGATTAAA
TCCATTGAAG ATTTAGACCG TGAAATCGCC GCAGCGACTG CTGCGGGCAA GCCCGTGATG
CTGGACCTCT ACGCCGATTG GTGTGTGGCC TGTAAAGAGT TTGAAGCCAT CACCTTTAAG
GACGCCGAAG TCTTAGCGCG GATGAATAAA ATAGTGTTAT TGCAGGCCGA CGTGACTAAG
AGTGATGCCA TTGATGTGGC ACTGCTGGAG AAATACAATG TCCTCGGTTT ACCCACGCTG
CTGATGTTTA ATGAGCAAGG CGAGCAAAGG GAAGATTTAA GAGTGACTGG CTTTATGGGA
CCGAAAGAAT TTGCCGCCCA TTTAGATCAC TTAGTGAAAT AA
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| Protein sequence | MKKLLSLIFT ALLFLTSLTL SGNAFANSFG FLKSEPELMP VDQAFAFDFK QEGNKVTLNW
VIADGYYMYR DKLKFSVNGA ELGTIDLPKG KPHNDEYFGE QEVYYTYIDI PVGLKQADDN
GTLSVTFMGC AEGKLCYPPT KRDVTLKAVA ANDGNIATGA DSNETTEPTA TADAKQTGSA
PSQPITQQDS LSQMLSNDSL LWTLVIFFGL GIGLALTPCV FPMYPILSGI IVGQGQKLST
AKAFTLSMAY VQGMAITYSI LGLVVASAGM KYQAALQHPA VLIFLAILFF VLSLSMFGLY
DLKLPSSWQE KMNSISNNQK GGNLVGVFLM GVISGLVASP CTTAPLSGAL VYVAQTGDLL
QGFLALYVLS MGMGVPLLII GTSGGKLLPR AGAWMNIIKT VFGFLLIAVS IVMLGRIWTG
VVSDLLWSLW GISFTGYLMH QNKLSAFNWK QTVRSVLLTL TLLASFSYGF QAVMGHFGFT
HAPMGGVATT EEEHGFKRIK SIEDLDREIA AATAAGKPVM LDLYADWCVA CKEFEAITFK
DAEVLARMNK IVLLQADVTK SDAIDVALLE KYNVLGLPTL LMFNEQGEQR EDLRVTGFMG
PKEFAAHLDH LVK
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