| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3397 |
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| Symbol | groEL |
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| ID | 4253963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4055174 |
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| End bp | 4056811 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120035 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_735520 |
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| Protein GI | 113971727 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00127477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCAGCTA AAGAAGTTGT ATTTGGTAAC GACGCACGCG TAAAAATGCT GGCTGGTGTA
AACATTCTGG CTAACGCAGT GAAAGTGACC TTAGGCCCTA AAGGCCGTAA CGTGGTATTA
GACAAGAGCT TCGGCTCACC ACTGATCACT AAAGACGGTG TGTCTGTTGC AAAAGAAATC
GAATTAGAAG ACAAATTCGA AAACATGGGC GCGCAAATGG TGAAAGAAGT TGCTTCTAAA
GCCAACGACG CCGCTGGTGA CGGTACTACT ACTGCAACTG TTCTGGCTCA AGCCATTGTG
ACTGAAGGTT TAAAAGCCGT TGCAGCGGGT ATGAACCCAA TGGACTTAAA GCGCGGTATC
GATAAAGCCG TTGCTGCAGC CGTTATCGAG CTGAAAAACC TTTCTCAAGA TTGCGCCGAC
TCAAAAGCAA TCGCTCAAGT AGGTACTATC TCTGCTAACT CTGACGAGTC AATCGGCGAA
ATCATCGCAA CTGCGATGGA AAAAGTCGGT AAAGAAGGCG TGATCACCGT TGAAGAAGGT
CAAGCACTGG AAAACGAACT GGACGTAGTA GAAGGTATGC AGTTCGACCG TGGTTACCTG
TCTCCATACT TCATCAACAA GCCAGAAACT GGCAGCGTTG AATTAGATCA CCCATTCGTA
CTGTTAGTAG ACAAGAAAAT CTCTAACATT CGCGAACTGT TGCCAATCCT TGAAGGTCTG
GCAAAAACCG GTAAGCCATT ACTGATCGTA GCCGAAGATG TTGAAGGCGA AGCCTTAGCA
ACGCTCGTTG TGAACAACAT GCGCGGTATC GTGAAAGTAG CTGCCGTTAA AGCCCCTGGC
TTTGGTGACC GTCGTAAGGC AATGCTGCAA GACGTGGCGA TTTTAACTGG CGGTACTGTA
ATCGCTGAAG AAATCGGTTT AGAGCTTGAA AAAGCAACCT TAGAAGATTT AGGTACTGCT
AAGCGTGTTG TGATCACTAA AGACAACACC ACCATCATCG ATGGTAACGG TGAGCAAGCG
CAAATCGAAG CGCGCGTAAG CCAAATCAAG CAACAAATCG AAGAATCAAC CTCAGACTAC
GACAAAGAAA AACTGCAAGA GCGTATGGCT AAATTAGCTG GCGGTGTTGC GGTAATCAAA
GTCGGTGCAG CGACCGAAGT TGAAATGAAA GAGAAAAAAG CTCGCGTAGA AGACGCGCTG
CACGCAACCC GTGCTGCGGT TGAAGAAGGC GTGGTACCTG GCGGCGGTGT TGCTCTGGTA
CGTGTTGCTT CTAAGATTGC TGACGTTGAA GTGGCTAACG AAGACCAAAA ACACGGTGTG
GTTATCGCAC TGCGTGCAAT GGAAGCGCCA CTGCGTCAAA TCGCAACTAA CGCAGGCGAA
GAAGCCTCTG TTGTGGCTAA CACAGTGAAG AACGGTAGCG GTAACTATGG TTACAACGCC
GGCAACGACA CCTACGGCGA CATGTTAGAA ATGGGTATCC TTGACCCAAC TAAAGTGACT
CGTAGCGCAC TGCAATTCGC AGCGTCTATC GCAGGCCTGA TGATCACCAC CGAAGCTATG
GTAGCTGAAC TGCCAAAGGC TGATGCGCCA GATATGGGCG GTATGGGTGG TATGGGTGGA
ATGGGCGGCA TGATGTGA
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| Protein sequence | MAAKEVVFGN DARVKMLAGV NILANAVKVT LGPKGRNVVL DKSFGSPLIT KDGVSVAKEI
ELEDKFENMG AQMVKEVASK ANDAAGDGTT TATVLAQAIV TEGLKAVAAG MNPMDLKRGI
DKAVAAAVIE LKNLSQDCAD SKAIAQVGTI SANSDESIGE IIATAMEKVG KEGVITVEEG
QALENELDVV EGMQFDRGYL SPYFINKPET GSVELDHPFV LLVDKKISNI RELLPILEGL
AKTGKPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DVAILTGGTV
IAEEIGLELE KATLEDLGTA KRVVITKDNT TIIDGNGEQA QIEARVSQIK QQIEESTSDY
DKEKLQERMA KLAGGVAVIK VGAATEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALV
RVASKIADVE VANEDQKHGV VIALRAMEAP LRQIATNAGE EASVVANTVK NGSGNYGYNA
GNDTYGDMLE MGILDPTKVT RSALQFAASI AGLMITTEAM VAELPKADAP DMGGMGGMGG
MGGMM
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