| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3361 |
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| Symbol | |
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| ID | 4253927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4008733 |
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| End bp | 4009983 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119999 |
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| Product | Rh family protein/ammonium transporter |
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| Protein accession | YP_735484 |
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| Protein GI | 113971691 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAAC TAACAAAATT AGGCGTGACA GTCTCTGAAC TGCGCTTTGC ACTCGACACC
TTTTATTTTT TGATTTCAGG CGCTTTGGTT ATGTGGATGG CGGCGGGTTT TGCCATGCTC
GAAGCCGGCC TAGTGCGCTC TAAAAATACC ACCGAAATTT TAACTAAAAA CGTGGTGTTA
TACGCGATTG CCTGTGTGAT GTACCTATTG GTTGGCTACA ACATTATGTA CGTCGATAAT
GCCGAAGGCG GCTGGTTGCC TTCACTCGGT ACGCTGATTG GCTCACAAGC CGAAGATGCA
AACCATGCTT TAGAATCTGA CTTCTTCTTC CAAGTGGTGT TTGTGGCAAC GGCGATGTCG
ATTGTCTCTG GCGCCGTGGC GGAGCGGATG AAGTTATGGG CTTTCCTGTT CTTCTCCGTG
GTGATGACAG GCATTATCTA CCCTGTTGAA GGCTACTGGA CTTGGGGTAA AGGCTTTATC
TCTAGCTTAG GTTTTGTGGA CTTTGCGGGT AGCGGTATTG TGCACATGAC AGGTGCTGCG
GCGGCTATCG CAGGGGTGTT ACTGCTCGGT GCTCGTAAGG GCAAATACGG CCCTAACGGC
CAAGTGAATC CGATTCCAGG CTCTAACCTG CCAATGGCAA CCTTAGGGAT GTTTATCCTG
TGGATGGGCT GGTTTGGTTT CAACGGTGGC TCACAATTAA TGGTTTCAGA TGCGGCCAAC
GCTAGCTCTG TCGCTAAAGT CTTCGTGAAC ACCAACACCG CGGCCGCTTT TGGTGCTATC
TCTGCCCTAG TTGTGTGCAA AATGATTTGG GGTAAAGCGG ACTTAACCAT GATCTTAAAC
GGCATTCTGG CGGGCTTAGT GGCGATTACT GCCGACCCGC TGTCGCCTTC GCTGCTGATG
GCAGGGGTGA TTGGTGTGGT TGCTGGTGGT TTAGTGGTGT TCTCTATCGT GGGTCTGGAC
AGAATCAAGA TCGACGACCC AGTGGGCGCG ATTTCTGTGC ACGGTGTTGC GGGTTTCCTC
GGTTTGATGT GTGTACCCTT ATCAAATGCC GACGCCACTA TCACAGCACA ATTAACTGGC
GCAGCGATAA TCTTCGCATG GGTATTTAGC GCGTCGTTTG CGGTGTGGTT TGTACTGAAG
ATGACCATGG GCATCCGTGT CTCTGAGGAA GAAGAATATA ACGGTATGGA TGCATCTGAT
TGTGGTATCG ACGCTTACCC AGAATTTGTG ACTGTTAAAA GTGCAGGCTA A
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| Protein sequence | MEELTKLGVT VSELRFALDT FYFLISGALV MWMAAGFAML EAGLVRSKNT TEILTKNVVL
YAIACVMYLL VGYNIMYVDN AEGGWLPSLG TLIGSQAEDA NHALESDFFF QVVFVATAMS
IVSGAVAERM KLWAFLFFSV VMTGIIYPVE GYWTWGKGFI SSLGFVDFAG SGIVHMTGAA
AAIAGVLLLG ARKGKYGPNG QVNPIPGSNL PMATLGMFIL WMGWFGFNGG SQLMVSDAAN
ASSVAKVFVN TNTAAAFGAI SALVVCKMIW GKADLTMILN GILAGLVAIT ADPLSPSLLM
AGVIGVVAGG LVVFSIVGLD RIKIDDPVGA ISVHGVAGFL GLMCVPLSNA DATITAQLTG
AAIIFAWVFS ASFAVWFVLK MTMGIRVSEE EEYNGMDASD CGIDAYPEFV TVKSAG
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