Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3339 |
Symbol | |
ID | 4253905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3986874 |
End bp | 3987809 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119977 |
Product | malate dehydrogenase |
Protein accession | YP_735462 |
Protein GI | 113971669 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTG CTGTACTTGG TGCTGCTGGT GGTATCGGCC AGGCTCTTGC CCTACTGTTA AAAACTCAAC TGCCTGCGGG TTCACAATTG TCTCTATACG ATATCGCACC GGTAACTCCG GGTGTTGCGG TTGACTTGAG CCACATCCCA ACTGCTGTTG AAATCAAAGG TTTTGCTGGC GAAGATCCAA CACCTGCACT GGTTGGTGCT GATGTTGTAT TGATCTCTGC TGGTGTTGCA CGTAAGCCAG GTATGGATCG CTCAGATCTG TTCAATATCA ACGCAGGTAT CGTACGTAAC CTGATCGAGA AAGTGGCAGT AACTTGCCCT AAAGCGTTAG TGGGTATCAT CACTAACCCA GTAAACACTA CTGTTGCTAT CGCGGCTGAA GTGTTGAAGA AAGCCGGTGT TTACGACAAG AACCGTCTGT TCGGTGTGAC GACTCTGGAC GTTATCCGTT CTGAAACCTT TATCGCTGAA TTAAAAGGCT TAAACGTTGC TGACGTTAAA GTGAACGTGA TCGGCGGCCA CAGTGGCGTG ACTATTCTGC CATTACTGTC TCAAGTTGAA GGCGTGACTT TCTCTGATGA AGAAGTGGCT TCTCTGACCA AGCGTATCCA AAACGCGGGT ACTGAAGTGG TTGAAGCTAA AGCCGGTGGC GGAAGCGCGA CTCTGTCTAT GGGTCAAGCG GCTTGCCGTT TCGGTATGTC TCTGGTTCGT GGTCTGCAAG GCGAAGCTAA CATCGTTGAA TGTGCCTATG TTGACGGCGG CAGCGAGCAC GCAGAATTCT TCGCTCAACC AGTGCTGTTA GGCAAAAACG GTATCGAAAA AGTACTGCCT TACGGTGAAG TGAGCGCATT CGAAGCTAAC GCCCGTGATT CTATGTTAGA TACGCTGAAA GGCGATATCA AACTAGGCGT TGATTTCGTT AAGTAA
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Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPAGSQL SLYDIAPVTP GVAVDLSHIP TAVEIKGFAG EDPTPALVGA DVVLISAGVA RKPGMDRSDL FNINAGIVRN LIEKVAVTCP KALVGIITNP VNTTVAIAAE VLKKAGVYDK NRLFGVTTLD VIRSETFIAE LKGLNVADVK VNVIGGHSGV TILPLLSQVE GVTFSDEEVA SLTKRIQNAG TEVVEAKAGG GSATLSMGQA ACRFGMSLVR GLQGEANIVE CAYVDGGSEH AEFFAQPVLL GKNGIEKVLP YGEVSAFEAN ARDSMLDTLK GDIKLGVDFV K
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