Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3332 |
Symbol | |
ID | 4253898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3980665 |
End bp | 3981888 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638119970 |
Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
Protein accession | YP_735455 |
Protein GI | 113971662 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0546769 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGTT CACAAGCCTA TGACATTGCC ATTGTGGGTG GCGGCATGGT GGGACTCGCC ACCGCGATAG GATTGGCGCA GGCCAACTTG AATGTCGTCG TGATCGATGC TCAAAGCACC CAAGCCGTGA GCGGTGAGCC AAGGCTTAGG GTCAGCGCGA TCAACAAAGC GAGCCAACGT CTGCTCGAGC ACCTCGGCGC TTGGCACTAT GTCGATGCCA GCCGCGCGAC GCCCTATCAA AAAATGGCGG TATGGGATAA AGACGGCTTT GGTAAAATCG CCTTCGATGC CAGTAGCATC AGTGAACCTA GCCTTGGCGC CATTATCGAA AATGATGCCA TCAGCTACGC CCTCGCCAAG CGTGCCAGTG AATTTGACAA TATCACCCAT ATCGAAAACC AACGCATAGA GCGTATCGCC TTTGGTGAGC GTGAAGCTTG GTTGACCTTA GCCAATAGCG CCGATGCCGA AATCGAGAGC GTTAGCGCCG CACTCGTAAT TGCCGCTGAT GGTGCTAATT CTTGGGTGCG CGAACAATGT AAGATCCCGT TAACCTTCTG GGATTATGGC CATCATGCGA TTGTGGCGAC CATTCGCAGC GAAATGCCGC ACCTTGCCAC CGCCCGCCAA GTGTTTTTGC AGGACGGCCC GCTGGCCTTC TTGCCGTTAT ATGAAGACAA CCTCTGCTCC ATCGTCTGGT CAGTGCCGCC AGAGCGCGCC ACCGAGTTAC TCGAGATGGC GCCAGAGCAG TTCGAGCGCA ATCTTACCGC CGCCTTCGAC GGTCGCCTCG GCATTTGCAA GCTTGAGAGT GAACGCCAAG CCTTTCCACT GCGGATGCGC TACGCCCGCC ATTTTGCCCG CCACCGTTTA GTGCTCGCGG GGGATGCGGC CCACACCATT CATCCATTAG CTGGCCAGGG GGTAAACCTA GGCTTCCTCG ATGCCGCCAG CATTATCGAA GTCATCGGCG AGCTACACGA GGCGGGTAAA GATATCGGTG ATTATGCCCA GCTGCGCGCC CTTGAGCGTT GGCGCAAGGC GGATGCGATG GAGATGATTG CGGCGATGGA AGGCTTTAAG CGCCTGTTCG AGGGTAGCAA TCCCCTTAAA AAAGCCATTC GCGATCTGGG ACTCAACCTC GTTGATAATG TCGCTGGGCT GAAAACAGTG TTCATGCAAC AGGCCATGGG CAATAAGTCC TCACTCCCCA AGTTATGTCG CTAG
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Protein sequence | MLSSQAYDIA IVGGGMVGLA TAIGLAQANL NVVVIDAQST QAVSGEPRLR VSAINKASQR LLEHLGAWHY VDASRATPYQ KMAVWDKDGF GKIAFDASSI SEPSLGAIIE NDAISYALAK RASEFDNITH IENQRIERIA FGEREAWLTL ANSADAEIES VSAALVIAAD GANSWVREQC KIPLTFWDYG HHAIVATIRS EMPHLATARQ VFLQDGPLAF LPLYEDNLCS IVWSVPPERA TELLEMAPEQ FERNLTAAFD GRLGICKLES ERQAFPLRMR YARHFARHRL VLAGDAAHTI HPLAGQGVNL GFLDAASIIE VIGELHEAGK DIGDYAQLRA LERWRKADAM EMIAAMEGFK RLFEGSNPLK KAIRDLGLNL VDNVAGLKTV FMQQAMGNKS SLPKLCR
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