| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3329 |
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| Symbol | |
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| ID | 4253895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3975744 |
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| End bp | 3978632 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119967 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_735452 |
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| Protein GI | 113971659 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC AAACCCTCAC TCAGTTAGAA CAGCACGATT TATTCTTACG TCGCCATATC
GGCCCGGATA GCAGCCAACA ACAAGAAATG TTGAACTACG TTGGTGCTGA GTCTCTGGAC
GATCTGACTG CGCAAATCGT GCCTGAGTCG ATCCGTTTAA GCCAAGAGTT GAGCATTGGT
GATTCCTGCG GCGAAGCCGA AGGCATTGCT TACATTCGTG GTTTAGCCAA ACAAAACCAA
GTCTTCAAAA GCTATATTGG TATGGGTTAC TACGGTACCC AAGTACCTAA TGTGATTTTA
CGTAACGTCT TCGAAAATCC AGGTTGGTAC ACGGCGTACA CGCCCTATCA GCCAGAGATC
GCCCAAGGCC GTTTAGAAGC CATTCTAAAC TTCCAACAAG TGTCTATGGA TTTAACCGGT
TTAGATTTAG CCTCTGCTTC ACTGCTGGAC GAAGCGACTG CCGCCGCCGA AGCGATGGCG
CTGGCTAAGC GTGTGTCTAA AGCCAAAAAA GCCAACATCT TCTTCGTAGC CGATGACGTA
TTCCCACAAA CCTTAGACGT AGTGAAGACT CGCGCTGAGT GTTTTGGTTT TGAAGTGGTG
GTAGGTCCTG CCCATGAAGC AGTAAACCAC GAACTGTTTG GTGCCCTGTT CCAGTATTCA
AACCGTTTCG GTCAAATCAC TGACTTCACT GACTTATTTG CCGAATTACG CGCGAAAAAC
GTGATTGTGA CAGTGGCTGC CGACATCATG GCATTAGTGT TACTCAAGTC ACCGGGTGCC
ATGGGCGCCG ATGTGGTCTT CGGTAGCGCG CAGCGTTTCG GTGTGCCGAT GGGCTTTGGT
GGTCCACACG CGGCCTTCTT CGTGGCCCGT GACGAGCACA AACGCTCTAT GCCAGGCCGT
ATCATCGGTG TGTCAAAGGA CACCCGTGGT AACCGCGCAC TGCGTATGGC GATGCAAACT
CGTGAGCAAC ATATTCGCCG CGAAAAAGCC AACTCAAACA TCTGTACCGC GCAAATTCTG
TTAGCGAACA TGGCGTCTTT CTACGCCGTA TTCCACGGCC CACAAGGCCT GAAAACCATC
GCATCACGCA TCAACCGCTT CACCGATATC TTAGCCGCTG GCTTACAAGC TAAAGGCGTG
AGCTTAGTGA ACAACACTTG GTTCGATACC ATCAGCATCA AAGGCTTAGA CGTTGCAGCT
GTGAATGCTC GCGCGCTGGC CGCTGAAATG AACCTGCGTT TCGATGCTGA CGGCATCGTT
GGCGTGAGCT TAGATGAAAC CACTCTCCGC ACCGATATCG ACGCCCTGTT CGATGTGATT
TTAGGTGCTG GTCATGGCTT AGACGTTGCC GCATTAGATG CGCAAATTGT GGCGCAAGGT
AGCCAATCGA TTCCTGAGGC TTTAGTGCGT CAGGATGCGA TTCTGACTCA CCCAACCTTC
AATCGCTACC AAAGCGAAAC CGAGATGATG CGTTATATCA AGCGTCTCGA AAGCAAAGAC
TTAGCACTGA ACTACTCAAT GATTTCATTG GGTTCATGCA CCATGAAGTT AAACGCTGCG
GTTGAAATGC TGCCGGTGAG CTGGCCAGAA TTTGCTAACA TGCACCCATT CTGCCCACTG
GATCAAGCCA AGGGTTACAC TCAACTGATT GAAGAATTAT CTTCATGGTT AGTGAATGTC
ACAGGTTACG ATGCAGTTTG TATCCAACCT AACTCTGGCG CACAGGGTGA ATACGCAGGT
CTGCTGGCGA TTCGTAAATA CCACGAGTCT CGCGGGCAGG CCCACAGAAA CATCTGCTTA
ATCCCACAAT CTGCCCACGG TACTAACCCT GCATCGGCGC AATTAGCCGG TATGCAAGTG
GTTGTGACTG CCTGTGACAA GCAAGGTAAC GTGGATTTAG AAGATCTGAA GGCCAAAGCG
GCTGAAGTGG CAGAAAACCT GTCATGTATC ATGATCACTT ACCCATCGAC TCACGGTGTG
TACGAAGAAT CTATCCGCGA AATCTGCAAC ATAGTGCATC AGCACGGTGG TCAAGTGTAC
TTGGACGGCG CCAACATGAA CGCCCAAGTT GGCTTAACCT CACCAGGCTT TATCGGTGCC
GACGTGTCGC ACCTTAACCT GCACAAAACC TTCGCGATTC CACACGGCGG CGGTGGTCCA
GGTATGGGCC CAATCGGTGT GAAAGCACAC TTAGCACCGT TCGTAGCGGG TCACGTTGTG
GTGAAACCAG GCCGCGAAAG CGATAACAAC GGTGCGGTAT CAGCAGCGCC ATACGGCAGT
GCTGGCATTC TGCCAATCAG CTGGATGTAC ATTAAGCTGC TCGGTTCAAA CGGCCTGAAA
AAGTCGACTC AAACCGCGCT GTTAAACGCT AACTACGTGA TGAAGAAGCT GTCTGAACAC
TACCCAGTAC TGTTCCGTGG CCGTAACGAT CGCGTCGCGC ACGAATGTAT TATCGACCTG
CGTCCAATTA AAGAAGCCTC TGGCGTGACC GAAATGGATA TCGCTAAGCG TCTGAACGAC
TACGGTTTCC ACGCGCCAAC CATGAGCTTC CCTGTTGCGG GCACGCTGAT GATTGAGCCA
ACCGAATCTG AGTCTAAGGT TGAACTGGAC CGCTTTATCG ACGCTATGGT GTCAATCCGC
GCTGAAATCG CTAAGGTTGA AGCGGGCGAG TGGCCAGCGG ACAACAACCC GCTGCACAAC
GCGCCACACA CTATGGCCGA TATTATGGAC AGCGCGTTTG ATTCACGCCC ATATAGCCGT
GAAGTTGCCG TGTTCCCAAG TGCCGCGGTG CGTACTAACA AGTTCTGGCC AACCGTGAAT
CGTATTGATG ACGTGTACGG CGACCGTAAT TTGTTCTGTG CGTGTGTGCC GTTATCAGAC
TACGAATAA
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| Protein sequence | MTKQTLTQLE QHDLFLRRHI GPDSSQQQEM LNYVGAESLD DLTAQIVPES IRLSQELSIG
DSCGEAEGIA YIRGLAKQNQ VFKSYIGMGY YGTQVPNVIL RNVFENPGWY TAYTPYQPEI
AQGRLEAILN FQQVSMDLTG LDLASASLLD EATAAAEAMA LAKRVSKAKK ANIFFVADDV
FPQTLDVVKT RAECFGFEVV VGPAHEAVNH ELFGALFQYS NRFGQITDFT DLFAELRAKN
VIVTVAADIM ALVLLKSPGA MGADVVFGSA QRFGVPMGFG GPHAAFFVAR DEHKRSMPGR
IIGVSKDTRG NRALRMAMQT REQHIRREKA NSNICTAQIL LANMASFYAV FHGPQGLKTI
ASRINRFTDI LAAGLQAKGV SLVNNTWFDT ISIKGLDVAA VNARALAAEM NLRFDADGIV
GVSLDETTLR TDIDALFDVI LGAGHGLDVA ALDAQIVAQG SQSIPEALVR QDAILTHPTF
NRYQSETEMM RYIKRLESKD LALNYSMISL GSCTMKLNAA VEMLPVSWPE FANMHPFCPL
DQAKGYTQLI EELSSWLVNV TGYDAVCIQP NSGAQGEYAG LLAIRKYHES RGQAHRNICL
IPQSAHGTNP ASAQLAGMQV VVTACDKQGN VDLEDLKAKA AEVAENLSCI MITYPSTHGV
YEESIREICN IVHQHGGQVY LDGANMNAQV GLTSPGFIGA DVSHLNLHKT FAIPHGGGGP
GMGPIGVKAH LAPFVAGHVV VKPGRESDNN GAVSAAPYGS AGILPISWMY IKLLGSNGLK
KSTQTALLNA NYVMKKLSEH YPVLFRGRND RVAHECIIDL RPIKEASGVT EMDIAKRLND
YGFHAPTMSF PVAGTLMIEP TESESKVELD RFIDAMVSIR AEIAKVEAGE WPADNNPLHN
APHTMADIMD SAFDSRPYSR EVAVFPSAAV RTNKFWPTVN RIDDVYGDRN LFCACVPLSD
YE
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