Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3266 |
Symbol | |
ID | 4253834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3898611 |
End bp | 3899906 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119906 |
Product | adenylosuccinate synthetase |
Protein accession | YP_735391 |
Protein GI | 113971598 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0104] Adenylosuccinate synthase |
TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000110825 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000153755 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGCAAAA ACGTAGTTGT TCTCGGCACC CAATGGGGTG ACGAAGGAAA AGGTAAGATT GTCGACCTTC TAACAGAACA GGCAAAATAT GTAGTTCGCT ACCAGGGCGG TCACAACGCG GGTCACACTC TTGTGATCAA TGGCGATAAG ACCGTACTTC ATCTGATCCC ATCAGGCATC CTACGCGACA ATGTAAAATG CATTATCGGT AATGGTGTGG TGCTTGCACC TGACGCACTG ATGAAAGAGA TCAAAATGCT CAAAGAGCGC GGCATTCCGG TTGAGGAACG TCTACTGATC TCTGAAGCAT GTCCGCTGAT CCTACCATTC CACTGTGCCT TAGACATCGC TCGCGAAAAA GCGCGCGGTA ACAAAGCTAT TGGTACTACG GGTCGTGGTA TTGGTCCTGC GTATGAAGAT AAGATTTCCC GTCGCGGTCT GCGTGTTGGC GATCTGTTCA ATGCTGAACT ATTTGCTGAA AAGCTGAAAG AAGTTATGGC ATATCATAAC TTTATGCTGA CAGAGTACTA CAAAGTTGAC GCCGTAGATT ACGAGCAAAC ACTGAGCGAC GCGTTAGCCT TAGCTGACTA CCTGAAGAGC ATGTGTGTTG ACGTAACTGA ACTCTTGGAT AACGCGCGTA AAGCGGGTGA GCCAATTCTG TTCGAAGGTG CACAAGGTAC ACTGTTAGAC ATTGACCACG GTACTTATCC GTTTGTGACT TCGTCAAACA CTACCGCAGG TGGTGTGGCG ACAGGCAGCG GCTTTGGTCC ACGTCATTTA GACTATGTCT TAGGTATTAT GAAGGCATAT ACCACTCGTG TGGGTGCTGG TCCTTTCCCA ACTGAACTCT TATGTGAAGT GGGCGACCAT TTAGGGACTA AGGGTCATGA GTTTGGTGCG ACTACCGGTC GTAAGCGTCG TCCTGGTTGG TTAGATGCAG TGGCAATGCG CCGCGCAGTA CAAATCAACA GCGTAAGCGG CTTCTGCTTA ACTAAGTTAG ACGTACTCGA TGGCCTGAAA GAAGTGAAGA TCTGTGTGGG TTACCAACAT TCAGATGGCA CTATCTCTAA GGTTACGCCA TTAGCGGCTG AAGGTTATGA GCAGGTCACG CCTGTTTATG AAACTATGCC AGGTTGGAGC GAGTCTACTT TCGGTGCGAC CTCTTTAGAG CAGTTACCGC AAGCCGCTAT CAACTACATC AAGCGTATTG AAGAGTTGTT AGAAACGCCG ATCGACATCA TTTCTACCGG TCCAGACCGT AATGAGACGA TGATTTTAGT TAGCCCATTT AACTAA
|
Protein sequence | MGKNVVVLGT QWGDEGKGKI VDLLTEQAKY VVRYQGGHNA GHTLVINGDK TVLHLIPSGI LRDNVKCIIG NGVVLAPDAL MKEIKMLKER GIPVEERLLI SEACPLILPF HCALDIAREK ARGNKAIGTT GRGIGPAYED KISRRGLRVG DLFNAELFAE KLKEVMAYHN FMLTEYYKVD AVDYEQTLSD ALALADYLKS MCVDVTELLD NARKAGEPIL FEGAQGTLLD IDHGTYPFVT SSNTTAGGVA TGSGFGPRHL DYVLGIMKAY TTRVGAGPFP TELLCEVGDH LGTKGHEFGA TTGRKRRPGW LDAVAMRRAV QINSVSGFCL TKLDVLDGLK EVKICVGYQH SDGTISKVTP LAAEGYEQVT PVYETMPGWS ESTFGATSLE QLPQAAINYI KRIEELLETP IDIISTGPDR NETMILVSPF N
|
| |